c2pfam

AT3G47640.1 :

Domain Description Evalue Bits GA Start End
POP1 Ribonucleases P/MRP protein subunit POP1 8.2E-06 15 22.20 27 150
HLH Helix-loop-helix DNA-binding domain 2.9E-07 20 20.70 28 76
Atg14 Vacuolar sorting 38 and autophagy-related subunit 14 1.1E-05 14 33.20 40 138
Peptidase_A3 Cauliflower mosaic virus peptidase (A3) 3.6E-05 12 21.30 43 122
YabA Initiation control protein YabA 2.7E-05 14 30.00 75 132
APG6_N Apg6 coiled-coil region 0.00044 10 45.00 78 127
ZapB Cell division protein ZapB 9.2E-05 12 31.20 80 124
OmpH Outer membrane protein (OmpH-like) 0.0001 12 28.70 89 132

240

POP1
HLH
Atg14
Peptidase_A3
YabA
APG6_N
ZapB
OmpH

References:

HLH
7553065 Transcription factors 2: helix-loop-helix. Protein Profile 1995;2:621-702.

Atg14

OmpH
2318304 Bacterial 'histone-like protein I' (HLP-I) is an outer membrane constituent? FEBS Lett 1990;262:123-126.
15304217 Crystal structure of Skp, a prefoldin-like chaperone that protects soluble and membrane proteins from aggregation. Mol Cell 2004;15:367-374.

Peptidase_A3

POP1
7926742 The POP1 gene encodes a protein component common to the RNase MRP and RNase P ribonucleoproteins. Genes Dev 1994;8:1423-1433.

APG6_N

YabA

ZapB

Domain	Description	Evalue	Bits	GA	Start	End
POP1	Ribonucleases P/MRP protein subunit POP1	8.2E-06	15	22.20	27	150
HLH	Helix-loop-helix DNA-binding domain	2.9E-07	20	20.70	28	76
Atg14	Vacuolar sorting 38 and autophagy-related subunit 14	1.1E-05	14	33.20	40	138
Peptidase_A3	Cauliflower mosaic virus peptidase (A3)	3.6E-05	12	21.30	43	122
YabA	Initiation control protein YabA	2.7E-05	14	30.00	75	132
APG6_N	Apg6 coiled-coil region	0.00044	10	45.00	78	127
ZapB	Cell division protein ZapB	9.2E-05	12	31.20	80	124
OmpH	Outer membrane protein (OmpH-like)	0.0001	12	28.70	89	132