c2pfam

AT3G48830.1 :

Domain Description Evalue Bits GA Start End
PolyA_pol Poly A polymerase head domain 1.3E-27 85 21.60 92 220
Autotransporter Autotransporter beta-domain 5E-07 17 22.00 159 209
PolyA_pol_RNAbd Probable RNA and SrmB- binding site of polymerase A 1E-16 48 21.20 247 309

519

PolyA_pol
Autotransporter
PolyA_pol_RNAbd

References:

PolyA_pol
1438224 Identification of the gene for an Escherichia coli poly(A) polymerase. Proc Natl Acad Sci U S A 1992;89:10380-10384.

Autotransporter
9778731 The great escape: structure and function of the autotransporter proteins. Trends Microbiol 1998;6:370-378.
3027577 Gene structure and extracellular secretion of Neisseria gonorrhoeae IgA protease. Nature 1987;325:458-462.
11980709 Export of autotransported proteins proceeds through an oligomeric ring shaped by C-terminal domains. EMBO J 2002;21:2122-2131.
15014442 Structure of the translocator domain of a bacterial autotransporter. EMBO J 2004;23:1257-1266.

PolyA_pol_RNAbd

Domain	Description	Evalue	Bits	GA	Start	End
PolyA_pol	Poly A polymerase head domain	1.3E-27	85	21.60	92	220
Autotransporter	Autotransporter beta-domain	5E-07	17	22.00	159	209
PolyA_pol_RNAbd	Probable RNA and SrmB- binding site of polymerase A	1E-16	48	21.20	247	309