c2pfam

AT3G49430.1 :

Domain Description Evalue Bits GA Start End
RRM_7 RNA recognition motif 2.9E-06 16 27.00 6 34
RRM_occluded Occluded RNA-recognition motif 7.5E-06 14 30.00 7 77
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4.6E-21 63 20.70 9 76
RRM_3 RNA binding motif 0.095 1 21.30 19 68
RRM_3 RNA binding motif 0.00013 11 21.30 124 183
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4.5E-15 44 20.70 124 186
RAP1 Rhoptry-associated protein 1 (RAP-1) 2.6E-06 14 20.50 167 292

300

RRM_7
RRM_occluded
RRM_1
RRM_3
RRM_3
RRM_1
RAP1

References:

RRM_3
12842046 Structure of the C-terminal domain of human La protein reveals a novel RNA recognition motif coupled to a helical nuclear retention element. Structure. 2003;11:833-843.

RAP1
11254620 Rhoptry-associated protein 1-binding monoclonal antibody raised against a heterologous peptide sequence inhibits Plasmodium falciparum growth in vitro. Infect Immun 2001;69:2558-2568.
9423886 Analysis of inhibitory epitopes in the Plasmodium falciparum rhoptry protein RAP-1 including identification of a second inhibitory epitope. Infect Immun 1998;66:380-386.

RRM_1
8290338 Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucleic Acid Res 1993;21:5803-5816.

RRM_7

RRM_occluded

Domain	Description	Evalue	Bits	GA	Start	End
RRM_7	RNA recognition motif	2.9E-06	16	27.00	6	34
RRM_occluded	Occluded RNA-recognition motif	7.5E-06	14	30.00	7	77
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	4.6E-21	63	20.70	9	76
RRM_3	RNA binding motif	0.095	1	21.30	19	68
RRM_3	RNA binding motif	0.00013	11	21.30	124	183
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	4.5E-15	44	20.70	124	186
RAP1	Rhoptry-associated protein 1 (RAP-1)	2.6E-06	14	20.50	167	292