c2pfam

AT3G49670.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 2.5E-16 49 20.70 26 65
LRR_6 Leucine Rich repeat 0.0063 6 23.40 68 83
LRR_8 Leucine rich repeat 9.5E-06 15 27.00 69 127
LRR_4 Leucine Rich repeats (2 copies) 0.00087 9 27.00 71 105
LRR_1 Leucine Rich Repeat 0.68 1 20.60 72 91
LRR_8 Leucine rich repeat 7.8E-06 15 27.00 94 137
LRR_4 Leucine Rich repeats (2 copies) 8.3E-06 16 27.00 95 135
LRR_8 Leucine rich repeat 7.3E-11 31 27.00 119 177
LRR_1 Leucine Rich Repeat 0.0021 8 20.60 119 137
LRR_6 Leucine Rich repeat 0.057 3 23.40 119 130
LRR_6 Leucine Rich repeat 0.25 1 23.40 143 156
LRR_1 Leucine Rich Repeat 0.00032 11 20.60 143 165
LRR_4 Leucine Rich repeats (2 copies) 6.6E-11 32 27.00 143 182
LRR_6 Leucine Rich repeat 0.18 2 23.40 166 176
LRR_1 Leucine Rich Repeat 0.0028 8 20.60 167 184
LRR_8 Leucine rich repeat 0.00059 9 27.00 188 223
LRR_4 Leucine Rich repeats (2 copies) 0.00024 11 27.00 192 222
LRR_1 Leucine Rich Repeat 0.026 5 20.60 192 213
LRR_6 Leucine Rich repeat 0.15 2 23.40 192 205
LRR_4 Leucine Rich repeats (2 copies) 0.0024 8 27.00 241 276
LRR_1 Leucine Rich Repeat 0.46 1 20.60 244 261
LRR_8 Leucine rich repeat 7.5E-09 25 27.00 264 323
LRR_6 Leucine Rich repeat 0.75 0 23.40 287 302
LRR_4 Leucine Rich repeats (2 copies) 4.7E-07 20 27.00 288 323
LRR_1 Leucine Rich Repeat 0.00081 10 20.60 288 310
LRR_1 Leucine Rich Repeat 0.9 0 20.60 312 328
LRR_4 Leucine Rich repeats (2 copies) 0.014 5 27.00 328 351
LRR_4 Leucine Rich repeats (2 copies) 7E-05 13 27.00 335 372
LRR_8 Leucine rich repeat 9E-08 21 27.00 335 392
LRR_4 Leucine Rich repeats (2 copies) 0.001 9 27.00 361 400
LRR_1 Leucine Rich Repeat 0.012 6 20.60 361 378
LRR_6 Leucine Rich repeat 0.015 5 23.40 361 373
LRR_8 Leucine rich repeat 4.1E-06 16 27.00 389 443
LRR_1 Leucine Rich Repeat 0.86 0 20.60 392 406
LRR_4 Leucine Rich repeats (2 copies) 0.033 4 27.00 408 443
LRR_8 Leucine rich repeat 7.6E-06 15 27.00 460 492
LRR_4 Leucine Rich repeats (2 copies) 0.0023 8 27.00 461 495
LRR_1 Leucine Rich Repeat 0.12 3 20.60 461 479
LRR_4 Leucine Rich repeats (2 copies) 0.00053 10 27.00 482 519
LRR_8 Leucine rich repeat 0.00021 10 27.00 502 540
LRR_8 Leucine rich repeat 3.4E-07 19 27.00 505 564
LRR_4 Leucine Rich repeats (2 copies) 9.2E-05 12 27.00 505 545
LRR_6 Leucine Rich repeat 0.32 1 23.40 505 518
LRR_1 Leucine Rich Repeat 0.19 2 20.60 506 527
LRR_6 Leucine Rich repeat 0.075 3 23.40 528 543
LRR_1 Leucine Rich Repeat 0.06 4 20.60 530 548
LRR_4 Leucine Rich repeats (2 copies) 3.7E-06 17 27.00 530 569
LRR_8 Leucine rich repeat 2.6E-08 23 27.00 530 588
LRR_8 Leucine rich repeat 2.1E-06 17 27.00 554 593
LRR_4 Leucine Rich repeats (2 copies) 2.6E-05 14 27.00 554 591
LRR_1 Leucine Rich Repeat 0.079 4 20.60 554 570
LRR_6 Leucine Rich repeat 0.19 2 23.40 554 564
LRR_6 Leucine Rich repeat 0.0059 6 23.40 576 589
LRR_1 Leucine Rich Repeat 0.1 3 20.60 577 594
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 160 23.10 691 961
Pkinase Protein kinase domain 0 156 20.40 692 908
Pkinase_fungal Fungal protein kinase 2.2E-05 13 24.10 799 863
APH Phosphotransferase enzyme family 7E-05 12 22.40 804 838

1002

LRRNT_2
LRR_6
LRR_8
LRR_4
LRR_1
LRR_8
LRR_4
LRR_8
LRR_1
LRR_6
LRR_6
LRR_1
LRR_4
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_4
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
LRR_1
LRR_4
LRR_4
LRR_8
LRR_4
LRR_1
LRR_6
LRR_8
LRR_1
LRR_4
LRR_8
LRR_4
LRR_1
LRR_4
LRR_8
LRR_8
LRR_4
LRR_6
LRR_1
LRR_6
LRR_1
LRR_4
LRR_8
LRR_8
LRR_4
LRR_1
LRR_6
LRR_6
LRR_1
PK_Tyr_Ser-Thr
Pkinase
Pkinase_fungal
APH

References:

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_8

LRR_6

LRR_4

Pkinase_fungal

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	2.5E-16	49	20.70	26	65
LRR_6	Leucine Rich repeat	0.0063	6	23.40	68	83
LRR_8	Leucine rich repeat	9.5E-06	15	27.00	69	127
LRR_4	Leucine Rich repeats (2 copies)	0.00087	9	27.00	71	105
LRR_1	Leucine Rich Repeat	0.68	1	20.60	72	91
LRR_8	Leucine rich repeat	7.8E-06	15	27.00	94	137
LRR_4	Leucine Rich repeats (2 copies)	8.3E-06	16	27.00	95	135
LRR_8	Leucine rich repeat	7.3E-11	31	27.00	119	177
LRR_1	Leucine Rich Repeat	0.0021	8	20.60	119	137
LRR_6	Leucine Rich repeat	0.057	3	23.40	119	130
LRR_6	Leucine Rich repeat	0.25	1	23.40	143	156
LRR_1	Leucine Rich Repeat	0.00032	11	20.60	143	165
LRR_4	Leucine Rich repeats (2 copies)	6.6E-11	32	27.00	143	182
LRR_6	Leucine Rich repeat	0.18	2	23.40	166	176
LRR_1	Leucine Rich Repeat	0.0028	8	20.60	167	184
LRR_8	Leucine rich repeat	0.00059	9	27.00	188	223
LRR_4	Leucine Rich repeats (2 copies)	0.00024	11	27.00	192	222
LRR_1	Leucine Rich Repeat	0.026	5	20.60	192	213
LRR_6	Leucine Rich repeat	0.15	2	23.40	192	205
LRR_4	Leucine Rich repeats (2 copies)	0.0024	8	27.00	241	276
LRR_1	Leucine Rich Repeat	0.46	1	20.60	244	261
LRR_8	Leucine rich repeat	7.5E-09	25	27.00	264	323
LRR_6	Leucine Rich repeat	0.75	0	23.40	287	302
LRR_4	Leucine Rich repeats (2 copies)	4.7E-07	20	27.00	288	323
LRR_1	Leucine Rich Repeat	0.00081	10	20.60	288	310
LRR_1	Leucine Rich Repeat	0.9	0	20.60	312	328
LRR_4	Leucine Rich repeats (2 copies)	0.014	5	27.00	328	351
LRR_4	Leucine Rich repeats (2 copies)	7E-05	13	27.00	335	372
LRR_8	Leucine rich repeat	9E-08	21	27.00	335	392
LRR_4	Leucine Rich repeats (2 copies)	0.001	9	27.00	361	400
LRR_1	Leucine Rich Repeat	0.012	6	20.60	361	378
LRR_6	Leucine Rich repeat	0.015	5	23.40	361	373
LRR_8	Leucine rich repeat	4.1E-06	16	27.00	389	443
LRR_1	Leucine Rich Repeat	0.86	0	20.60	392	406
LRR_4	Leucine Rich repeats (2 copies)	0.033	4	27.00	408	443
LRR_8	Leucine rich repeat	7.6E-06	15	27.00	460	492
LRR_4	Leucine Rich repeats (2 copies)	0.0023	8	27.00	461	495
LRR_1	Leucine Rich Repeat	0.12	3	20.60	461	479
LRR_4	Leucine Rich repeats (2 copies)	0.00053	10	27.00	482	519
LRR_8	Leucine rich repeat	0.00021	10	27.00	502	540
LRR_8	Leucine rich repeat	3.4E-07	19	27.00	505	564
LRR_4	Leucine Rich repeats (2 copies)	9.2E-05	12	27.00	505	545
LRR_6	Leucine Rich repeat	0.32	1	23.40	505	518
LRR_1	Leucine Rich Repeat	0.19	2	20.60	506	527
LRR_6	Leucine Rich repeat	0.075	3	23.40	528	543
LRR_1	Leucine Rich Repeat	0.06	4	20.60	530	548
LRR_4	Leucine Rich repeats (2 copies)	3.7E-06	17	27.00	530	569
LRR_8	Leucine rich repeat	2.6E-08	23	27.00	530	588
LRR_8	Leucine rich repeat	2.1E-06	17	27.00	554	593
LRR_4	Leucine Rich repeats (2 copies)	2.6E-05	14	27.00	554	591
LRR_1	Leucine Rich Repeat	0.079	4	20.60	554	570
LRR_6	Leucine Rich repeat	0.19	2	23.40	554	564
LRR_6	Leucine Rich repeat	0.0059	6	23.40	576	589
LRR_1	Leucine Rich Repeat	0.1	3	20.60	577	594
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	160	23.10	691	961
Pkinase	Protein kinase domain	0	156	20.40	692	908
Pkinase_fungal	Fungal protein kinase	2.2E-05	13	24.10	799	863
APH	Phosphotransferase enzyme family	7E-05	12	22.40	804	838