c2pfam

AT3G51320.1 :

Domain Description Evalue Bits GA Start End
PPR_2 PPR repeat family 2.3E-05 13 30.00 87 126
PPR PPR repeat 0.43 0 25.00 89 114
PPR_3 Pentatricopeptide repeat domain 0.72 -1 25.00 111 127
PPR_1 PPR repeat 0.0044 6 23.80 113 127
PPR PPR repeat 0.58 0 25.00 119 149
DUF2650 Protein of unknown function (DUF2650) 1 -2 19.80 131 139
DUF2650 Protein of unknown function (DUF2650) 0.00013 10 19.80 156 169
PPR_3 Pentatricopeptide repeat domain 0.76 -1 25.00 157 179
PPR PPR repeat 0.0001 11 25.00 157 183
PPR_1 PPR repeat 0.024 3 23.80 157 178
PPR_2 PPR repeat family 0.0039 6 30.00 157 183
PPR_1 PPR repeat 1.4E-08 23 23.80 181 210
PPR_3 Pentatricopeptide repeat domain 2.6E-05 13 25.00 182 225
PPR_2 PPR repeat family 2.2E-11 33 30.00 183 215
PPR PPR repeat 3.2E-10 29 25.00 185 215
PPR_2 PPR repeat family 8.6E-12 34 30.00 213 260
PPR_1 PPR repeat 0.0081 5 23.80 214 241
PPR PPR repeat 2.2E-08 23 25.00 216 246
PPR_3 Pentatricopeptide repeat domain 0.0094 5 25.00 236 261
PPR PPR repeat 0.15 2 25.00 255 273
PPR_2 PPR repeat family 0.0078 5 30.00 285 310
PPR_3 Pentatricopeptide repeat domain 0.43 -1 25.00 285 310
PPR_1 PPR repeat 0.12 1 23.80 289 309
PPR PPR repeat 0.0016 8 25.00 289 310
PPR_1 PPR repeat 1E-05 14 23.80 315 342
PPR_2 PPR repeat family 1.1E-11 34 30.00 315 363
PPR PPR repeat 3.1E-09 26 25.00 317 343
PPR_1 PPR repeat 0.004 6 23.80 347 367
PPR PPR repeat 0.0013 8 25.00 352 379
PPR PPR repeat 0.001 8 25.00 393 413
TPR_19 Tetratricopeptide repeat 0.00035 10 25.00 393 419
TPR_19 Tetratricopeptide repeat 0.56 0 25.00 444 463
PPR_3 Pentatricopeptide repeat domain 0.0085 5 25.00 456 487
PPR PPR repeat 0.0038 7 25.00 459 486
PPR_2 PPR repeat family 0.75 -1 30.00 461 486

530

PPR_2
PPR
PPR_3
PPR_1
PPR
DUF2650
DUF2650
PPR_3
PPR
PPR_1
PPR_2
PPR_1
PPR_3
PPR_2
PPR
PPR_2
PPR_1
PPR
PPR_3
PPR
PPR_2
PPR_3
PPR_1
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
TPR_19
TPR_19
PPR_3
PPR
PPR_2

References:

TPR_19

DUF2650

PPR_3

PPR_2

PPR_1

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.

Domain	Description	Evalue	Bits	GA	Start	End
PPR_2	PPR repeat family	2.3E-05	13	30.00	87	126
PPR	PPR repeat	0.43	0	25.00	89	114
PPR_3	Pentatricopeptide repeat domain	0.72	-1	25.00	111	127
PPR_1	PPR repeat	0.0044	6	23.80	113	127
PPR	PPR repeat	0.58	0	25.00	119	149
DUF2650	Protein of unknown function (DUF2650)	1	-2	19.80	131	139
DUF2650	Protein of unknown function (DUF2650)	0.00013	10	19.80	156	169
PPR_3	Pentatricopeptide repeat domain	0.76	-1	25.00	157	179
PPR	PPR repeat	0.0001	11	25.00	157	183
PPR_1	PPR repeat	0.024	3	23.80	157	178
PPR_2	PPR repeat family	0.0039	6	30.00	157	183
PPR_1	PPR repeat	1.4E-08	23	23.80	181	210
PPR_3	Pentatricopeptide repeat domain	2.6E-05	13	25.00	182	225
PPR_2	PPR repeat family	2.2E-11	33	30.00	183	215
PPR	PPR repeat	3.2E-10	29	25.00	185	215
PPR_2	PPR repeat family	8.6E-12	34	30.00	213	260
PPR_1	PPR repeat	0.0081	5	23.80	214	241
PPR	PPR repeat	2.2E-08	23	25.00	216	246
PPR_3	Pentatricopeptide repeat domain	0.0094	5	25.00	236	261
PPR	PPR repeat	0.15	2	25.00	255	273
PPR_2	PPR repeat family	0.0078	5	30.00	285	310
PPR_3	Pentatricopeptide repeat domain	0.43	-1	25.00	285	310
PPR_1	PPR repeat	0.12	1	23.80	289	309
PPR	PPR repeat	0.0016	8	25.00	289	310
PPR_1	PPR repeat	1E-05	14	23.80	315	342
PPR_2	PPR repeat family	1.1E-11	34	30.00	315	363
PPR	PPR repeat	3.1E-09	26	25.00	317	343
PPR_1	PPR repeat	0.004	6	23.80	347	367
PPR	PPR repeat	0.0013	8	25.00	352	379
PPR	PPR repeat	0.001	8	25.00	393	413
TPR_19	Tetratricopeptide repeat	0.00035	10	25.00	393	419
TPR_19	Tetratricopeptide repeat	0.56	0	25.00	444	463
PPR_3	Pentatricopeptide repeat domain	0.0085	5	25.00	456	487
PPR	PPR repeat	0.0038	7	25.00	459	486
PPR_2	PPR repeat family	0.75	-1	30.00	461	486