AT3G53490.1 :

DomainDescriptionEvalueBitsGAStartEnd
GCMGCM motif protein9.7E-051225.004373
PAP_PilOPilin accessory protein (PilO)8.1E-061420.00124205
VpuVpu protein0.77-123.60147161
DUF5305Family of unknown function (DUF5305)0.000191129.00152210
DUF2207Predicted membrane protein (DUF2207)9.4E-051123.00154204
S1FADNA binding protein S1FA2.8E-051420.50161196
VpuVpu protein6.8E-061623.60168217
DUF4381Domain of unknown function (DUF4381)4.9E-051327.20168209
LapA_domLipopolysaccharide assembly protein A domain2.7E-072028.00170207
DUF2627Protein of unknown function (DUF2627)3.6E-051421.70173206
DUF2681Protein of unknown function (DUF2681)5.7E-051320.70176203
TPR_21Tetratricopeptide repeat-like domain0.000121125.50176202

 225

GCM
PAP_PilO
Vpu
DUF5305
DUF2207
S1FA
Vpu
DUF4381
LapA_dom
DUF2627
DUF2681
TPR_21


References:

DUF2207

DUF2627

TPR_21

LapA_dom

PAP_PilO
11751821 Genes required for plasmid R64 thin-pilus biogenesis: identification and localization of products of the pilK, pilM, pilO, pilP, pilR, and pilT genes. J Bacteriol 2002;184:444-451.

Vpu
9338017 Enhancement of retroviral production from packaging cell lines expressing the human immunodeficiency type 1 VPU gene. Gene Ther 1997;4:868-874.
7853484 The human immunodeficiency virus type 1 Vpu protein specifically binds to the cytoplasmic domain of CD4: implications for the mechanism of degradation. J Virol 1995;69:1510-1520.
9182993 Secondary structure and tertiary fold of the human immunodeficiency virus protein U (Vpu) cytoplasmic domain in solution. Eur J Biochem 1997;245:581-588.

DUF4381

S1FA
7739894 Molecular cloning of a small DNA binding protein with specificity for a tissue-specific negative element within the rps1 promoter. Nucleic Acids Res 1995;23:1165-1169.

DUF2681

DUF5305

GCM