c2pfam

AT3G53680.1 :

Domain Description Evalue Bits GA Start End
TDBD Tify domain binding domain 2.9E-15 45 23.60 213 268
zf-HC5HC2H PHD-like zinc-binding domain 0.72 -1 29.10 413 436
TDBD Tify domain binding domain 2E-18 56 23.60 421 471
TrmK tRNA (adenine(22)-N(1))-methyltransferase 2.1E-05 13 20.40 466 498
zf-HC5HC2H PHD-like zinc-binding domain 9.4E-05 12 29.10 484 517
Zf_RING KIAA1045 RING finger 0.00014 11 30.80 485 514
Prok-RING_1 Prokaryotic RING finger family 1 0.00097 8 29.10 487 514
PHD PHD-finger 4.6E-12 35 27.90 488 529
PHD_2 PHD-finger 3.9E-08 22 28.00 498 528
zf-RING_9 Putative zinc-RING and/or ribbon 0.026 4 28.10 500 529
zf-HC5HC2H PHD-like zinc-binding domain 0.0023 7 29.10 565 605
zf-RING_9 Putative zinc-RING and/or ribbon 4.7E-05 13 28.10 566 623
PHD PHD-finger 8.8E-07 18 27.90 566 621
Prok-RING_1 Prokaryotic RING finger family 1 0.00051 9 29.10 577 605
Zf_RING KIAA1045 RING finger 0.031 4 30.80 580 604
TDBD Tify domain binding domain 0.73 -1 23.60 582 595

841

TDBD
zf-HC5HC2H
TDBD
TrmK
zf-HC5HC2H
Zf_RING
Prok-RING_1
PHD
PHD_2
zf-RING_9
zf-HC5HC2H
zf-RING_9
PHD
Prok-RING_1
Zf_RING
TDBD

References:

PHD_2

zf-HC5HC2H

TrmK

zf-RING_9

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

Zf_RING

Prok-RING_1

TDBD

Domain	Description	Evalue	Bits	GA	Start	End
TDBD	Tify domain binding domain	2.9E-15	45	23.60	213	268
zf-HC5HC2H	PHD-like zinc-binding domain	0.72	-1	29.10	413	436
TDBD	Tify domain binding domain	2E-18	56	23.60	421	471
TrmK	tRNA (adenine(22)-N(1))-methyltransferase	2.1E-05	13	20.40	466	498
zf-HC5HC2H	PHD-like zinc-binding domain	9.4E-05	12	29.10	484	517
Zf_RING	KIAA1045 RING finger	0.00014	11	30.80	485	514
Prok-RING_1	Prokaryotic RING finger family 1	0.00097	8	29.10	487	514
PHD	PHD-finger	4.6E-12	35	27.90	488	529
PHD_2	PHD-finger	3.9E-08	22	28.00	498	528
zf-RING_9	Putative zinc-RING and/or ribbon	0.026	4	28.10	500	529
zf-HC5HC2H	PHD-like zinc-binding domain	0.0023	7	29.10	565	605
zf-RING_9	Putative zinc-RING and/or ribbon	4.7E-05	13	28.10	566	623
PHD	PHD-finger	8.8E-07	18	27.90	566	621
Prok-RING_1	Prokaryotic RING finger family 1	0.00051	9	29.10	577	605
Zf_RING	KIAA1045 RING finger	0.031	4	30.80	580	604
TDBD	Tify domain binding domain	0.73	-1	23.60	582	595