c2pfam

AT3G54850.1 :

Domain Description Evalue Bits GA Start End
Mod_r Modifier of rudimentary (Mod(r)) protein 9.8E-05 12 27.00 125 208
U-box U-box domain 2.6E-24 75 21.40 248 318
zf-NOSIP Zinc-finger of nitric oxide synthase-interacting protein 0.00014 12 30.00 250 281
zf-Nse Zinc-finger of the MIZ type in Nse subunit 7.9E-07 19 20.70 252 290
zf-RING_UBOX RING-type zinc-finger 2.1E-05 14 25.20 254 290
zf-C3HC4_4 zinc finger of C3HC4-type, RING 0.00029 11 30.00 254 290
HEAT_2 HEAT repeats 6.3E-06 16 27.70 350 412
Arm Armadillo/beta-catenin-like repeat 1.7E-13 40 20.60 376 415
KAP Kinesin-associated protein (KAP) 0.00039 8 19.40 377 478
Arm_2 Armadillo-like 9.3E-06 15 20.40 379 486
HEAT_EZ HEAT-like repeat 0.0012 9 27.00 386 411
HEAT HEAT repeat 0.0038 8 23.50 389 414
Cnd1 non-SMC mitotic condensation complex subunit 1 0.0013 9 26.40 392 488
Arm Armadillo/beta-catenin-like repeat 1.7E-05 15 20.60 417 456
HEAT_2 HEAT repeats 0.00075 10 27.70 426 490
HEAT HEAT repeat 0.64 1 23.50 435 452
Arm Armadillo/beta-catenin-like repeat 1.3E-08 25 20.60 459 497
Cnd1 non-SMC mitotic condensation complex subunit 1 0.013 5 26.40 486 553
KAP Kinesin-associated protein (KAP) 0.0007 8 19.40 494 578
Arm Armadillo/beta-catenin-like repeat 0.03 4 20.60 504 536
HEAT_2 HEAT repeats 0.00081 10 27.70 538 614
Arm Armadillo/beta-catenin-like repeat 1.8E-07 21 20.60 540 579

632

Mod_r
U-box
zf-NOSIP
zf-Nse
zf-RING_UBOX
zf-C3HC4_4
HEAT_2
Arm
KAP
Arm_2
HEAT_EZ
HEAT
Cnd1
Arm
HEAT_2
HEAT
Arm
Cnd1
KAP
Arm
HEAT_2
Arm

References:

Arm_2

Arm
9298899 Three-dimensional structure of the armadillo repeat region of beta-catenin. Cell 1997;90:871-882.
8573337 Signal transduction of beta-catenin. Curr Opin Cell Biol 1995;7:634-640.
9309175 Armadillo and dTCF: a marriage made in the nucleus. Curr Opin Genet Dev 1997;7:459-466.
8259519 Association of the APC tumor suppressor protein with catenins. Science 1993;262:1734-1737.
8259518 Association of the APC gene product with beta-catenin. Science 1993;262:1731-1734.
2261639 The segment polarity gene armadillo encodes a functionally modular protein that is the Drosophila homolog of human plakoglobin. Cell 1990;63:1167-1176.

Cnd1

zf-RING_UBOX

HEAT
7550332 HEAT repeats in the Huntington's disease protein. Nat Genet 1995;11:115-116.
9989501 The structure of the protein phosphatase 2A PR65/A subunit reveals the conformation of its 15 tandemly repeated HEAT motifs. Cell 1999;96:99-110.

U-box
10704423 The U box is a modified RING finger - a common domain in ubiquitination. Curr Biol 2000;10:132-134.

HEAT_EZ

KAP
10819327 C. elegans KLP-11/OSM-3/KAP-1: orthologs of the sea urchin kinesin-II, and mouse KIF3A/KIFB/KAP3 kinesin complexes. DNA Res 2000;7:121-125.
11912492 Identification of a link between the tumour suppressor APC and the kinesin superfamily. Nat Cell Biol 2002;4:323-327.

Mod_r
7651329 Modifier of rudimentary p1, mod(r)p1, a trans-acting regulatory mutation of rudimentary. Mol Gen Genet 1995;248:69-78.
15240819 The growth-regulatory protein HCRP1/hVps37A is a subunit of mammalian ESCRT-I and mediates receptor down-regulation. Mol Biol Cell 2004;15:4337-4346.

zf-C3HC4_4

zf-Nse
12966087 Novel essential DNA repair proteins Nse1 and Nse2 are subunits of the fission yeast Smc5-Smc6 complex. J Biol Chem 2003;278:45460-45467.

zf-NOSIP

HEAT_2

Domain	Description	Evalue	Bits	GA	Start	End
Mod_r	Modifier of rudimentary (Mod(r)) protein	9.8E-05	12	27.00	125	208
U-box	U-box domain	2.6E-24	75	21.40	248	318
zf-NOSIP	Zinc-finger of nitric oxide synthase-interacting protein	0.00014	12	30.00	250	281
zf-Nse	Zinc-finger of the MIZ type in Nse subunit	7.9E-07	19	20.70	252	290
zf-RING_UBOX	RING-type zinc-finger	2.1E-05	14	25.20	254	290
zf-C3HC4_4	zinc finger of C3HC4-type, RING	0.00029	11	30.00	254	290
HEAT_2	HEAT repeats	6.3E-06	16	27.70	350	412
Arm	Armadillo/beta-catenin-like repeat	1.7E-13	40	20.60	376	415
KAP	Kinesin-associated protein (KAP)	0.00039	8	19.40	377	478
Arm_2	Armadillo-like	9.3E-06	15	20.40	379	486
HEAT_EZ	HEAT-like repeat	0.0012	9	27.00	386	411
HEAT	HEAT repeat	0.0038	8	23.50	389	414
Cnd1	non-SMC mitotic condensation complex subunit 1	0.0013	9	26.40	392	488
Arm	Armadillo/beta-catenin-like repeat	1.7E-05	15	20.60	417	456
HEAT_2	HEAT repeats	0.00075	10	27.70	426	490
HEAT	HEAT repeat	0.64	1	23.50	435	452
Arm	Armadillo/beta-catenin-like repeat	1.3E-08	25	20.60	459	497
Cnd1	non-SMC mitotic condensation complex subunit 1	0.013	5	26.40	486	553
KAP	Kinesin-associated protein (KAP)	0.0007	8	19.40	494	578
Arm	Armadillo/beta-catenin-like repeat	0.03	4	20.60	504	536
HEAT_2	HEAT repeats	0.00081	10	27.70	538	614
Arm	Armadillo/beta-catenin-like repeat	1.8E-07	21	20.60	540	579