c2pfam

AT3G55130.1 :

Domain Description Evalue Bits GA Start End
AAA_16 AAA ATPase domain 2.3E-06 18 32.60 92 146
MeaB Methylmalonyl Co-A mutase-associated GTPase MeaB 3.2E-05 13 23.10 94 136
ABC_tran ABC transporter 6.2E-28 88 23.10 100 253
SMC_N RecF/RecN/SMC N terminal domain 8.9E-05 12 40.00 107 285
RsgA_GTPase RsgA GTPase 3.1E-06 17 30.00 108 133
AAA_25 AAA domain 1.4E-05 15 27.00 109 172
AAA_22 AAA domain 0.00024 12 27.00 109 134
AAA_29 P-loop containing region of AAA domain 2.6E-07 21 27.00 110 131
Dynamin_N Dynamin family 0.0002 12 21.00 113 134
AAA_23 AAA domain 0.00031 11 27.00 113 130
APS_kinase Adenylylsulphate kinase 0.0092 6 20.70 113 150
AAA_28 AAA domain 0.00028 11 27.00 114 133
MMR_HSR1 GTPase of unknown function 1.1E-05 16 24.50 114 145
AAA_21 AAA domain, putative AbiEii toxin, Type IV TA system 0.00029 11 27.00 114 131
AAA_18 AAA domain 0.0011 10 29.40 115 133
AAA_21 AAA domain, putative AbiEii toxin, Type IV TA system 0.0024 8 27.00 225 284
APS_kinase Adenylylsulphate kinase 0.064 3 20.70 258 287
ABC2_membrane_7 ABC-2 type transporter 1.7E-07 21 22.70 282 371
ABC2_membrane ABC-2 type transporter 0 132 25.50 422 629
AAA_29 P-loop containing region of AAA domain 0.12 3 27.00 644 662
AAA_16 AAA ATPase domain 0.14 3 32.60 645 679
AAA_18 AAA domain 0.64 1 29.40 647 667
APS_kinase Adenylylsulphate kinase 0.36 1 20.70 647 677

725

AAA_16
MeaB
ABC_tran
SMC_N
RsgA_GTPase
AAA_25
AAA_22
AAA_29
Dynamin_N
AAA_23
APS_kinase
AAA_28
MMR_HSR1
AAA_21
AAA_18
AAA_21
APS_kinase
ABC2_membrane_7
ABC2_membrane
AAA_29
AAA_16
AAA_18
APS_kinase

References:

AAA_16

ABC_tran
1864505 Homology between proteins controlling Streptomyces fradiae tylosin resistance and ATP-binding transport. Gene 1991;102:27-32.
1977073 Structure and function of haemolysin B,P-glycoprotein and other members of a novel family of membrane translocators. Mol Microbiol 1990;4:873-880.
2229036 Binding protein-dependent transport systems. J Bioenerg Biomembr 1990;22:571-592.
9872322 Crystal structure of the ATP-binding subunit of an ABC transporter. Nature 1998;396:703-707.

RsgA_GTPase

ABC2_membrane
1303751 A new subfamily of bacterial ABC-type transport systems catalyzing export of drugs and carbohydrates. Protein Sci 1992;1:1326-1332.

AAA_21

APS_kinase
9786849 Adenosine 5'-phosphosulfate kinase from Penicillium chrysogenum. site- directed mutagenesis at putative phosphoryl-accepting and ATP P-loop residues. J Biol Chem 1998;273:28583-28589.

Dynamin_N
8939066 Dynamin GTPase, a force-generating molecular switch. Bioessays 1996;18:885-893.
2144893 Molecular cloning of the microtubule-associated mechanochemical enzyme dynamin reveals homology with a new family of GTP-binding proteins. Nature 1990;347:256-261.

MMR_HSR1
8180467 Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. Mamm Genome 1994;5:100-105.

ABC2_membrane_7

AAA_29

AAA_28

AAA_25

SMC_N
10429180 Structural maintenance of chromosomes (SMC) proteins: conserved molecular properties for multiple biological functions. Eur J Biochem 1999;263:6-13.
9640531 SMC protein complexes and higher-order chromosome dynamics. Curr Opin Cell Biol 1998;10:317-322.

AAA_23

AAA_22

MeaB

AAA_18

Domain	Description	Evalue	Bits	GA	Start	End
AAA_16	AAA ATPase domain	2.3E-06	18	32.60	92	146
MeaB	Methylmalonyl Co-A mutase-associated GTPase MeaB	3.2E-05	13	23.10	94	136
ABC_tran	ABC transporter	6.2E-28	88	23.10	100	253
SMC_N	RecF/RecN/SMC N terminal domain	8.9E-05	12	40.00	107	285
RsgA_GTPase	RsgA GTPase	3.1E-06	17	30.00	108	133
AAA_25	AAA domain	1.4E-05	15	27.00	109	172
AAA_22	AAA domain	0.00024	12	27.00	109	134
AAA_29	P-loop containing region of AAA domain	2.6E-07	21	27.00	110	131
Dynamin_N	Dynamin family	0.0002	12	21.00	113	134
AAA_23	AAA domain	0.00031	11	27.00	113	130
APS_kinase	Adenylylsulphate kinase	0.0092	6	20.70	113	150
AAA_28	AAA domain	0.00028	11	27.00	114	133
MMR_HSR1	GTPase of unknown function	1.1E-05	16	24.50	114	145
AAA_21	AAA domain, putative AbiEii toxin, Type IV TA system	0.00029	11	27.00	114	131
AAA_18	AAA domain	0.0011	10	29.40	115	133
AAA_21	AAA domain, putative AbiEii toxin, Type IV TA system	0.0024	8	27.00	225	284
APS_kinase	Adenylylsulphate kinase	0.064	3	20.70	258	287
ABC2_membrane_7	ABC-2 type transporter	1.7E-07	21	22.70	282	371
ABC2_membrane	ABC-2 type transporter	0	132	25.50	422	629
AAA_29	P-loop containing region of AAA domain	0.12	3	27.00	644	662
AAA_16	AAA ATPase domain	0.14	3	32.60	645	679
AAA_18	AAA domain	0.64	1	29.40	647	667
APS_kinase	Adenylylsulphate kinase	0.36	1	20.70	647	677