c2pfam

AT3G55950.1 :

Domain Description Evalue Bits GA Start End
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 3.8E-05 12 21.70 79 100
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 8.3E-07 18 21.70 160 185
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 1.5E-09 26 21.70 202 230
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 5.6E-06 15 21.70 245 268
Neugrin Neugrin 7.5E-05 12 21.80 425 552
Pkinase Protein kinase domain 0 147 20.40 497 722
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 141 23.10 497 788
ABC1 ABC1 family 1E-06 18 20.60 500 527
APH Phosphotransferase enzyme family 5.5E-05 12 22.40 546 659

814

RCC1_2
RCC1_2
RCC1_2
RCC1_2
Neugrin
Pkinase
PK_Tyr_Ser-Thr
ABC1
APH

References:

Neugrin
11118320 Two novel genes, human neugrin and mouse m-neugrin, are upregulated with neuronal differentiation in neuroblastoma cells. Biochem Biophys Res Commun 2000;279:526-533.

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

PK_Tyr_Ser-Thr

RCC1_2

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

Domain	Description	Evalue	Bits	GA	Start	End
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	3.8E-05	12	21.70	79	100
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	8.3E-07	18	21.70	160	185
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	1.5E-09	26	21.70	202	230
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	5.6E-06	15	21.70	245	268
Neugrin	Neugrin	7.5E-05	12	21.80	425	552
Pkinase	Protein kinase domain	0	147	20.40	497	722
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	141	23.10	497	788
ABC1	ABC1 family	1E-06	18	20.60	500	527
APH	Phosphotransferase enzyme family	5.5E-05	12	22.40	546	659