c2pfam

AT3G56200.1 :

Domain Description Evalue Bits GA Start End
Aa_trans Transmembrane amino acid transporter protein 0 174 19.60 22 423
Trp_Tyr_perm Tryptophan/tyrosine permease family 4.4E-08 21 19.90 28 242
Yip1 Yip1 domain 0.59 -2 30.90 32 194
Phage_holin_3_6 Putative Actinobacterial Holin-X, holin superfamily III 0.55 -2 28.40 36 74
Phage_holin_3_6 Putative Actinobacterial Holin-X, holin superfamily III 2E-05 13 28.40 97 174
Phage_holin_3_6 Putative Actinobacterial Holin-X, holin superfamily III 0.071 1 28.40 179 202
Phage_holin_3_6 Putative Actinobacterial Holin-X, holin superfamily III 0.33 -1 28.40 259 281
Yip1 Yip1 domain 3.3E-08 22 30.90 261 424

435

Aa_trans
Trp_Tyr_perm
Yip1
Phage_holin_3_6
Phage_holin_3_6
Phage_holin_3_6
Phage_holin_3_6
Yip1

References:

Trp_Tyr_perm
9422600 The tryptophanase gene cluster of Haemophilus influenzae type b: evidence for horizontal gene transfer. J Bacteriol 1998;180:107-118.

Aa_trans
9349821 Identification and characterization of the vesicular GABA transporter. Nature 1997;389:870-876.

Yip1
9724632 Specific binding to a novel and essential Golgi membrane protein (Yip1p) functionally links the transport GTPases Ypt1p and Ypt31p. EMBO J 1998;17:4954-4963.

Phage_holin_3_6

Domain	Description	Evalue	Bits	GA	Start	End
Aa_trans	Transmembrane amino acid transporter protein	0	174	19.60	22	423
Trp_Tyr_perm	Tryptophan/tyrosine permease family	4.4E-08	21	19.90	28	242
Yip1	Yip1 domain	0.59	-2	30.90	32	194
Phage_holin_3_6	Putative Actinobacterial Holin-X, holin superfamily III	0.55	-2	28.40	36	74
Phage_holin_3_6	Putative Actinobacterial Holin-X, holin superfamily III	2E-05	13	28.40	97	174
Phage_holin_3_6	Putative Actinobacterial Holin-X, holin superfamily III	0.071	1	28.40	179	202
Phage_holin_3_6	Putative Actinobacterial Holin-X, holin superfamily III	0.33	-1	28.40	259	281
Yip1	Yip1 domain	3.3E-08	22	30.90	261	424