c2pfam

AT3G57000.1 :

Domain Description Evalue Bits GA Start End
ATP-synt_E ATP synthase E chain 0.0025 7 21.00 9 64
MCM_bind Mini-chromosome maintenance replisome factor 1.3E-05 12 25.60 10 127
TAF4 Transcription initiation factor TFIID component TAF4 family 4.9E-06 15 21.70 11 89
DUF2956 Protein of unknown function (DUF2956) 0.86 -1 25.00 12 23
CDC45 CDC45-like protein 0.0007 7 26.70 14 60
DUF2956 Protein of unknown function (DUF2956) 0.00055 9 25.00 31 68
EMG1 EMG1/NEP1 methyltransferase 0 236 28.20 93 291
CDC45 CDC45-like protein 0.78 -4 26.70 243 259

298

ATP-synt_E
MCM_bind
TAF4
DUF2956
CDC45
DUF2956
EMG1
CDC45

References:

ATP-synt_E
8011660 Fo membrane domain of ATP synthase from bovine heart mitochondria: purification, subunit composition, and reconstitution with F1-ATPase. Biochemistry 1994;33:7971-7978.

MCM_bind

CDC45
9660782 The human homolog of Saccharomyces cerevisiae CDC45. J Biol Chem 1998;273:18205-18209.

DUF2956

EMG1
11935223 Nep1p (Emg1p), a novel protein conserved in eukaryotes and archaea, is involved in ribosome biogenesis. Curr Genet 2002;40:326-338.
18063569 The yeast ribosome synthesis factor Emg1 is a novel member of the superfamily of alpha/beta knot fold methyltransferases. Nucleic Acids Res. 2008;36:629-639.

TAF4
12237303 Functional analysis of the TFIID-specific yeast TAF4 (yTAF(II)48) reveals an unexpected organization of its histone-fold domain. J Biol Chem 2002;277:45510-45517.

Domain	Description	Evalue	Bits	GA	Start	End
ATP-synt_E	ATP synthase E chain	0.0025	7	21.00	9	64
MCM_bind	Mini-chromosome maintenance replisome factor	1.3E-05	12	25.60	10	127
TAF4	Transcription initiation factor TFIID component TAF4 family	4.9E-06	15	21.70	11	89
DUF2956	Protein of unknown function (DUF2956)	0.86	-1	25.00	12	23
CDC45	CDC45-like protein	0.0007	7	26.70	14	60
DUF2956	Protein of unknown function (DUF2956)	0.00055	9	25.00	31	68
EMG1	EMG1/NEP1 methyltransferase	0	236	28.20	93	291
CDC45	CDC45-like protein	0.78	-4	26.70	243	259