c2pfam

AT3G57100.1 :

Domain Description Evalue Bits GA Start End
DUF677 Protein of unknown function (DUF677) 0 402 22.90 12 347
Mce4_CUP1 Cholesterol uptake porter CUP1 of Mce4, putative 1.6E-05 13 27.30 43 109
CLZ C-terminal leucine zipper domain of cyclic nucleotide-gated channels 0.004 7 26.70 45 76
Lebercilin Ciliary protein causing Leber congenital amaurosis disease 0.56 -1 34.30 46 75
BLOC1_2 Biogenesis of lysosome-related organelles complex-1 subunit 2 0.97 -1 25.00 48 68
DUF2400 Protein of unknown function (DUF2400) 0.00066 9 21.90 51 114
DUF2400 Protein of unknown function (DUF2400) 0.0038 6 21.90 144 204
PhaP_Bmeg Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) 0.096 2 22.20 167 197
Lebercilin Ciliary protein causing Leber congenital amaurosis disease 0.015 4 34.30 172 204
CLZ C-terminal leucine zipper domain of cyclic nucleotide-gated channels 0.0043 7 26.70 175 203
BLOC1_2 Biogenesis of lysosome-related organelles complex-1 subunit 2 0.067 3 25.00 181 199
PhaP_Bmeg Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) 8.8E-05 11 22.20 239 301
BLOC1_2 Biogenesis of lysosome-related organelles complex-1 subunit 2 0.0021 8 25.00 245 285
Lebercilin Ciliary protein causing Leber congenital amaurosis disease 0.0049 6 34.30 271 328
DUF2400 Protein of unknown function (DUF2400) 0.52 -1 21.90 276 298
PhaP_Bmeg Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) 0.38 0 22.20 307 341
CLZ C-terminal leucine zipper domain of cyclic nucleotide-gated channels 0.57 0 26.70 309 325

359

DUF677
Mce4_CUP1
CLZ
Lebercilin
BLOC1_2
DUF2400
DUF2400
PhaP_Bmeg
Lebercilin
CLZ
BLOC1_2
PhaP_Bmeg
BLOC1_2
Lebercilin
DUF2400
PhaP_Bmeg
CLZ

References:

CLZ

PhaP_Bmeg

Mce4_CUP1

DUF2400

BLOC1_2
15102850 Identification of snapin and three novel proteins (BLOS1, BLOS2, and BLOS3/reduced pigmentation) as subunits of biogenesis of lysosome-related organelles complex-1 (BLOC-1). J Biol Chem. 2004;279:28393-28401.

Lebercilin

DUF677
10196471 Isolation and characterization of a cDNA clone from Arabidopsis thaliana with partial sequence similarity to integrins. Gene 1999;230:33-40.

Domain	Description	Evalue	Bits	GA	Start	End
DUF677	Protein of unknown function (DUF677)	0	402	22.90	12	347
Mce4_CUP1	Cholesterol uptake porter CUP1 of Mce4, putative	1.6E-05	13	27.30	43	109
CLZ	C-terminal leucine zipper domain of cyclic nucleotide-gated channels	0.004	7	26.70	45	76
Lebercilin	Ciliary protein causing Leber congenital amaurosis disease	0.56	-1	34.30	46	75
BLOC1_2	Biogenesis of lysosome-related organelles complex-1 subunit 2	0.97	-1	25.00	48	68
DUF2400	Protein of unknown function (DUF2400)	0.00066	9	21.90	51	114
DUF2400	Protein of unknown function (DUF2400)	0.0038	6	21.90	144	204
PhaP_Bmeg	Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg)	0.096	2	22.20	167	197
Lebercilin	Ciliary protein causing Leber congenital amaurosis disease	0.015	4	34.30	172	204
CLZ	C-terminal leucine zipper domain of cyclic nucleotide-gated channels	0.0043	7	26.70	175	203
BLOC1_2	Biogenesis of lysosome-related organelles complex-1 subunit 2	0.067	3	25.00	181	199
PhaP_Bmeg	Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg)	8.8E-05	11	22.20	239	301
BLOC1_2	Biogenesis of lysosome-related organelles complex-1 subunit 2	0.0021	8	25.00	245	285
Lebercilin	Ciliary protein causing Leber congenital amaurosis disease	0.0049	6	34.30	271	328
DUF2400	Protein of unknown function (DUF2400)	0.52	-1	21.90	276	298
PhaP_Bmeg	Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg)	0.38	0	22.20	307	341
CLZ	C-terminal leucine zipper domain of cyclic nucleotide-gated channels	0.57	0	26.70	309	325