c2pfam

AT1G17230.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 2E-16 50 20.70 25 63
LRR_8 Leucine rich repeat 6.8E-05 12 27.00 69 126
LRR_4 Leucine Rich repeats (2 copies) 0.0012 9 27.00 70 103
LRR_1 Leucine Rich Repeat 0.055 4 20.60 93 112
LRR_1 Leucine Rich Repeat 0.68 1 20.60 116 129
LRR_4 Leucine Rich repeats (2 copies) 0.014 6 27.00 116 155
LRR_8 Leucine rich repeat 3.8E-10 29 27.00 140 197
LRR_1 Leucine Rich Repeat 0.018 6 20.60 141 162
DUF5612 Domain of unknown function (DUF5612) 0.3 1 25.00 143 181
LRR_1 Leucine Rich Repeat 0.044 5 20.60 164 185
LRR_4 Leucine Rich repeats (2 copies) 0.00051 10 27.00 164 191
LRR_8 Leucine rich repeat 6E-07 19 27.00 196 247
DUF5612 Domain of unknown function (DUF5612) 0.063 3 25.00 211 252
LRR_4 Leucine Rich repeats (2 copies) 0.00012 12 27.00 212 249
LRR_4 Leucine Rich repeats (2 copies) 3E-05 14 27.00 235 275
LRR_1 Leucine Rich Repeat 0.4 2 20.60 236 256
LRR_8 Leucine rich repeat 4.5E-08 23 27.00 236 295
DUF5612 Domain of unknown function (DUF5612) 0.015 5 25.00 254 302
LRR_4 Leucine Rich repeats (2 copies) 0.0019 8 27.00 260 295
LRR_1 Leucine Rich Repeat 0.16 3 20.60 286 306
LRR_8 Leucine rich repeat 0.00037 10 27.00 311 341
LRR_1 Leucine Rich Repeat 0.65 1 20.60 312 329
LRR_4 Leucine Rich repeats (2 copies) 0.0012 9 27.00 312 347
LRR_4 Leucine Rich repeats (2 copies) 0.03 5 27.00 332 369
LRR_1 Leucine Rich Repeat 0.29 2 20.60 332 353
LRR_8 Leucine rich repeat 1.6E-05 14 27.00 354 391
LRR_1 Leucine Rich Repeat 0.1 3 20.60 357 378
LRR_4 Leucine Rich repeats (2 copies) 0.0049 7 27.00 357 396
LRR_4 Leucine Rich repeats (2 copies) 0.00045 10 27.00 384 416
LRR_8 Leucine rich repeat 3.7E-07 20 27.00 406 463
LRR_1 Leucine Rich Repeat 0.087 4 20.60 407 425
LRR_4 Leucine Rich repeats (2 copies) 0.0003 11 27.00 428 464
LRR_1 Leucine Rich Repeat 0.22 2 20.60 429 450
LRR_4 Leucine Rich repeats (2 copies) 1.8E-06 18 27.00 451 492
LRR_8 Leucine rich repeat 4E-07 19 27.00 452 511
LRR_1 Leucine Rich Repeat 0.26 2 20.60 476 498
DUF5612 Domain of unknown function (DUF5612) 0.11 2 25.00 495 541
LRR_4 Leucine Rich repeats (2 copies) 2.4E-06 18 27.00 499 536
LRR_1 Leucine Rich Repeat 0.0012 9 20.60 500 522
LRR_8 Leucine rich repeat 1.2E-08 24 27.00 500 559
LRR_1 Leucine Rich Repeat 0.25 2 20.60 525 546
LRR_4 Leucine Rich repeats (2 copies) 0.0093 6 27.00 529 560
LRR_4 Leucine Rich repeats (2 copies) 0.00077 10 27.00 550 584
LRR_1 Leucine Rich Repeat 0.096 4 20.60 550 565
LRR_1 Leucine Rich Repeat 0.0017 9 20.60 573 592
LRR_4 Leucine Rich repeats (2 copies) 4E-05 14 27.00 573 607
LRR_8 Leucine rich repeat 1.4E-10 30 27.00 573 632
LRR_4 Leucine Rich repeats (2 copies) 0.00059 10 27.00 599 636
LRR_1 Leucine Rich Repeat 0.0012 9 20.60 624 643
LRR_8 Leucine rich repeat 1.4E-06 18 27.00 624 680
DUF5612 Domain of unknown function (DUF5612) 0.18 1 25.00 630 688
LRR_4 Leucine Rich repeats (2 copies) 0.00023 11 27.00 645 683
LRR_1 Leucine Rich Repeat 0.0011 9 20.60 646 667
LSR Lipolysis stimulated receptor (LSR) 0.0017 8 25.00 736 756
Pkinase Protein kinase domain 0 167 20.40 800 1070
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 150 23.10 804 1070
Kinase-like Kinase-like 4.9E-05 12 25.00 899 1001
APH Phosphotransferase enzyme family 2.3E-06 17 22.40 908 955
Pkinase_fungal Fungal protein kinase 9.7E-07 17 24.10 912 961

1101

LRRNT_2
LRR_8
LRR_4
LRR_1
LRR_1
LRR_4
LRR_8
LRR_1
DUF5612
LRR_1
LRR_4
LRR_8
DUF5612
LRR_4
LRR_4
LRR_1
LRR_8
DUF5612
LRR_4
LRR_1
LRR_8
LRR_1
LRR_4
LRR_4
LRR_1
LRR_8
LRR_1
LRR_4
LRR_4
LRR_8
LRR_1
LRR_4
LRR_1
LRR_4
LRR_8
LRR_1
DUF5612
LRR_4
LRR_1
LRR_8
LRR_1
LRR_4
LRR_4
LRR_1
LRR_1
LRR_4
LRR_8
LRR_4
LRR_1
LRR_8
DUF5612
LRR_4
LRR_1
LSR
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
APH
Pkinase_fungal

References:

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

LRR_8

Pkinase_fungal

Kinase-like

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_4

DUF5612

LSR
10224102 Molecular cloning of a lipolysis-stimulated remnant receptor expressed in the liver. J Biol Chem. 1999;274:13390-13398.
15265030 Distribution of the lipolysis stimulated receptor in adult and embryonic murine tissues and lethality of LSR-/- embryos at 12.5 to 14.5 days of gestation. Eur J Biochem. 2004;271:3103-3114.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	2E-16	50	20.70	25	63
LRR_8	Leucine rich repeat	6.8E-05	12	27.00	69	126
LRR_4	Leucine Rich repeats (2 copies)	0.0012	9	27.00	70	103
LRR_1	Leucine Rich Repeat	0.055	4	20.60	93	112
LRR_1	Leucine Rich Repeat	0.68	1	20.60	116	129
LRR_4	Leucine Rich repeats (2 copies)	0.014	6	27.00	116	155
LRR_8	Leucine rich repeat	3.8E-10	29	27.00	140	197
LRR_1	Leucine Rich Repeat	0.018	6	20.60	141	162
DUF5612	Domain of unknown function (DUF5612)	0.3	1	25.00	143	181
LRR_1	Leucine Rich Repeat	0.044	5	20.60	164	185
LRR_4	Leucine Rich repeats (2 copies)	0.00051	10	27.00	164	191
LRR_8	Leucine rich repeat	6E-07	19	27.00	196	247
DUF5612	Domain of unknown function (DUF5612)	0.063	3	25.00	211	252
LRR_4	Leucine Rich repeats (2 copies)	0.00012	12	27.00	212	249
LRR_4	Leucine Rich repeats (2 copies)	3E-05	14	27.00	235	275
LRR_1	Leucine Rich Repeat	0.4	2	20.60	236	256
LRR_8	Leucine rich repeat	4.5E-08	23	27.00	236	295
DUF5612	Domain of unknown function (DUF5612)	0.015	5	25.00	254	302
LRR_4	Leucine Rich repeats (2 copies)	0.0019	8	27.00	260	295
LRR_1	Leucine Rich Repeat	0.16	3	20.60	286	306
LRR_8	Leucine rich repeat	0.00037	10	27.00	311	341
LRR_1	Leucine Rich Repeat	0.65	1	20.60	312	329
LRR_4	Leucine Rich repeats (2 copies)	0.0012	9	27.00	312	347
LRR_4	Leucine Rich repeats (2 copies)	0.03	5	27.00	332	369
LRR_1	Leucine Rich Repeat	0.29	2	20.60	332	353
LRR_8	Leucine rich repeat	1.6E-05	14	27.00	354	391
LRR_1	Leucine Rich Repeat	0.1	3	20.60	357	378
LRR_4	Leucine Rich repeats (2 copies)	0.0049	7	27.00	357	396
LRR_4	Leucine Rich repeats (2 copies)	0.00045	10	27.00	384	416
LRR_8	Leucine rich repeat	3.7E-07	20	27.00	406	463
LRR_1	Leucine Rich Repeat	0.087	4	20.60	407	425
LRR_4	Leucine Rich repeats (2 copies)	0.0003	11	27.00	428	464
LRR_1	Leucine Rich Repeat	0.22	2	20.60	429	450
LRR_4	Leucine Rich repeats (2 copies)	1.8E-06	18	27.00	451	492
LRR_8	Leucine rich repeat	4E-07	19	27.00	452	511
LRR_1	Leucine Rich Repeat	0.26	2	20.60	476	498
DUF5612	Domain of unknown function (DUF5612)	0.11	2	25.00	495	541
LRR_4	Leucine Rich repeats (2 copies)	2.4E-06	18	27.00	499	536
LRR_1	Leucine Rich Repeat	0.0012	9	20.60	500	522
LRR_8	Leucine rich repeat	1.2E-08	24	27.00	500	559
LRR_1	Leucine Rich Repeat	0.25	2	20.60	525	546
LRR_4	Leucine Rich repeats (2 copies)	0.0093	6	27.00	529	560
LRR_4	Leucine Rich repeats (2 copies)	0.00077	10	27.00	550	584
LRR_1	Leucine Rich Repeat	0.096	4	20.60	550	565
LRR_1	Leucine Rich Repeat	0.0017	9	20.60	573	592
LRR_4	Leucine Rich repeats (2 copies)	4E-05	14	27.00	573	607
LRR_8	Leucine rich repeat	1.4E-10	30	27.00	573	632
LRR_4	Leucine Rich repeats (2 copies)	0.00059	10	27.00	599	636
LRR_1	Leucine Rich Repeat	0.0012	9	20.60	624	643
LRR_8	Leucine rich repeat	1.4E-06	18	27.00	624	680
DUF5612	Domain of unknown function (DUF5612)	0.18	1	25.00	630	688
LRR_4	Leucine Rich repeats (2 copies)	0.00023	11	27.00	645	683
LRR_1	Leucine Rich Repeat	0.0011	9	20.60	646	667
LSR	Lipolysis stimulated receptor (LSR)	0.0017	8	25.00	736	756
Pkinase	Protein kinase domain	0	167	20.40	800	1070
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	150	23.10	804	1070
Kinase-like	Kinase-like	4.9E-05	12	25.00	899	1001
APH	Phosphotransferase enzyme family	2.3E-06	17	22.40	908	955
Pkinase_fungal	Fungal protein kinase	9.7E-07	17	24.10	912	961