c2pfam

AT3G58620.1 :

Domain Description Evalue Bits GA Start End
Alkyl_sulf_dimr Alkyl sulfatase dimerisation 5.7E-06 18 26.00 199 264
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.00027 12 27.20 201 266
NARP1 NMDA receptor-regulated protein 1 0.00029 11 21.80 202 286
Wzy_C_2 Virulence factor membrane-bound polymerase, C-terminal 0.00017 12 28.50 212 266
TPR_14 Tetratricopeptide repeat 4.2E-07 21 23.50 215 248
TPR_12 Tetratricopeptide repeat 3.6E-06 18 30.10 217 265
TPR_2 Tetratricopeptide repeat 8.2E-09 26 22.40 217 244
TPR_6 Tetratricopeptide repeat 0.0016 10 26.30 217 243
TPR_10 Tetratricopeptide repeat 0.00035 11 27.50 218 240
TPR_11 TPR repeat 8E-12 36 26.80 218 259
TPR_16 Tetratricopeptide repeat 1.8E-11 36 32.70 218 278
TPR_4 Tetratricopeptide repeat 0.1 5 22.00 219 236
TPR_15 Tetratricopeptide repeat 0.00042 10 26.20 219 302
TPR_3 Tetratricopeptide repeat 0.0079 7 20.70 220 235
BTAD Bacterial transcriptional activator domain 0.21 3 21.00 221 238
TPR_9 Tetratricopeptide repeat 2.3E-06 19 35.00 221 270
TPR_1 Tetratricopeptide repeat 1.7E-06 19 20.40 222 244
Fis1_TPR_C Fis1 C-terminal tetratricopeptide repeat 0.0066 8 25.30 222 244
MIT MIT (microtubule interacting and transport) domain 0.0037 8 28.30 223 239
TPR_8 Tetratricopeptide repeat 0.00019 13 25.70 223 244
TPR_7 Tetratricopeptide repeat 0.0009 10 27.90 223 245
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.00036 12 27.20 224 303
TPR_19 Tetratricopeptide repeat 9.8E-10 30 25.00 224 282
TPR_17 Tetratricopeptide repeat 1.7E-05 16 24.40 233 265
TPR_20 Tetratricopeptide repeat 1.8E-05 16 25.00 234 293
TPR_4 Tetratricopeptide repeat 0.0002 13 22.00 245 264
TPR_10 Tetratricopeptide repeat 0.00062 11 27.50 248 274
TPR_2 Tetratricopeptide repeat 8.4E-06 17 22.40 248 277
TPR_1 Tetratricopeptide repeat 0.00015 13 20.40 249 278
TPR_12 Tetratricopeptide repeat 0.0003 12 30.10 249 302
DUF3856 Domain of Unknown Function (DUF3856) 0.42 2 27.00 250 268
BTAD Bacterial transcriptional activator domain 0.0042 8 21.00 250 298
TPR_8 Tetratricopeptide repeat 0.02 6 25.70 251 277
TPR_14 Tetratricopeptide repeat 1.1E-05 17 23.50 251 288
Alkyl_sulf_dimr Alkyl sulfatase dimerisation 0.03 6 26.00 252 297
TPR_11 TPR repeat 2.8E-08 24 26.80 255 293
TPR_17 Tetratricopeptide repeat 5.5E-07 21 24.40 268 299
TPR_19 Tetratricopeptide repeat 0.0024 9 25.00 275 302
TPR_16 Tetratricopeptide repeat 0.082 5 32.70 275 301
TPR_9 Tetratricopeptide repeat 0.27 2 35.00 275 317
TPR_8 Tetratricopeptide repeat 0.00083 11 25.70 279 299
TPR_1 Tetratricopeptide repeat 0.03 5 20.40 279 300
TPR_2 Tetratricopeptide repeat 0.0046 8 22.40 279 302
TPR_14 Tetratricopeptide repeat 0.0037 9 23.50 280 302
TPR_4 Tetratricopeptide repeat 0.15 4 22.00 280 302
TPR_7 Tetratricopeptide repeat 0.041 5 27.90 282 300
TPR_6 Tetratricopeptide repeat 0.2 4 26.30 284 301
DUF3856 Domain of Unknown Function (DUF3856) 0.00081 10 27.00 399 476
TPR_15 Tetratricopeptide repeat 0.37 1 26.20 401 436
TPR_2 Tetratricopeptide repeat 0.0046 8 22.40 402 432
TPR_8 Tetratricopeptide repeat 0.36 2 25.70 405 432
TPR_12 Tetratricopeptide repeat 0.041 5 30.10 408 445
TPR_14 Tetratricopeptide repeat 0.81 2 23.50 409 428
TPR_19 Tetratricopeptide repeat 0.87 1 25.00 409 438
TPR_11 TPR repeat 0.034 5 26.80 411 435
TPR_1 Tetratricopeptide repeat 0.095 4 20.40 413 435
TPR_7 Tetratricopeptide repeat 0.39 2 27.90 414 430
TPR_2 Tetratricopeptide repeat 0.0052 8 22.40 454 479
TPR_1 Tetratricopeptide repeat 0.0016 9 20.40 455 479
TPR_16 Tetratricopeptide repeat 0.023 6 32.70 455 515
TPR_11 TPR repeat 3.3E-06 18 26.80 456 497
TPR_8 Tetratricopeptide repeat 0.2 3 25.70 456 481
TPR_3 Tetratricopeptide repeat 0.65 1 20.70 458 472
TPR_17 Tetratricopeptide repeat 0.0029 9 24.40 472 499
DUF3856 Domain of Unknown Function (DUF3856) 0.094 4 27.00 478 512
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.004 8 27.20 485 538
TPR_1 Tetratricopeptide repeat 3.4E-10 30 20.40 485 516
TPR_2 Tetratricopeptide repeat 9.9E-07 20 22.40 485 515
TPR_12 Tetratricopeptide repeat 3.9E-05 15 30.10 485 541
TPR_8 Tetratricopeptide repeat 0.088 4 25.70 486 515
TPR_7 Tetratricopeptide repeat 0.0033 9 27.90 486 511
BTAD Bacterial transcriptional activator domain 0.0047 8 21.00 490 550
Fis1_TPR_C Fis1 C-terminal tetratricopeptide repeat 0.78 1 25.30 494 519
TPR_11 TPR repeat 7.7E-05 13 26.80 494 531
TPR_14 Tetratricopeptide repeat 0.054 6 23.50 495 524
TPR_9 Tetratricopeptide repeat 0.0022 9 35.00 499 548
TPR_17 Tetratricopeptide repeat 0.0073 8 24.40 506 537
TPR_19 Tetratricopeptide repeat 0.00086 11 25.00 507 557
TPR_14 Tetratricopeptide repeat 0.05 6 23.50 518 554
TPR_2 Tetratricopeptide repeat 4.8E-05 14 22.40 518 548
TPR_1 Tetratricopeptide repeat 1.2E-05 16 20.40 518 541
TPR_15 Tetratricopeptide repeat 0.13 2 26.20 518 556
TPR_4 Tetratricopeptide repeat 0.15 4 22.00 519 538
TPR_6 Tetratricopeptide repeat 1.1E-05 17 26.30 519 549
TPR_7 Tetratricopeptide repeat 0.0037 8 27.90 519 541
TPR_16 Tetratricopeptide repeat 0.0081 8 32.70 522 555
NARP1 NMDA receptor-regulated protein 1 0.15 2 21.80 523 567
TPR_10 Tetratricopeptide repeat 0.031 5 27.50 524 541
TPR_11 TPR repeat 0.28 2 26.80 529 541
Phosducin Phosducin 1.7E-06 18 20.30 537 678
Thioredoxin Thioredoxin 7.3E-10 30 22.10 613 669

682

Alkyl_sulf_dimr
ANAPC3
NARP1
Wzy_C_2
TPR_14
TPR_12
TPR_2
TPR_6
TPR_10
TPR_11
TPR_16
TPR_4
TPR_15
TPR_3
BTAD
TPR_9
TPR_1
Fis1_TPR_C
MIT
TPR_8
TPR_7
ANAPC3
TPR_19
TPR_17
TPR_20
TPR_4
TPR_10
TPR_2
TPR_1
TPR_12
DUF3856
BTAD
TPR_8
TPR_14
Alkyl_sulf_dimr
TPR_11
TPR_17
TPR_19
TPR_16
TPR_9
TPR_8
TPR_1
TPR_2
TPR_14
TPR_4
TPR_7
TPR_6
DUF3856
TPR_15
TPR_2
TPR_8
TPR_12
TPR_14
TPR_19
TPR_11
TPR_1
TPR_7
TPR_2
TPR_1
TPR_16
TPR_11
TPR_8
TPR_3
TPR_17
DUF3856
ANAPC3
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
BTAD
Fis1_TPR_C
TPR_11
TPR_14
TPR_9
TPR_17
TPR_19
TPR_14
TPR_2
TPR_1
TPR_15
TPR_4
TPR_6
TPR_7
TPR_16
NARP1
TPR_10
TPR_11
Phosducin
Thioredoxin

References:

TPR_20

TPR_19

NARP1
11297529 N-methyl-D-aspartate receptors regulate a group of transiently expressed genes in the developing brain. J Biol Chem. 2001;276:14257-14263.

TPR_17

ANAPC3

TPR_15

TPR_14

DUF3856

TPR_11

TPR_10

TPR_3
12799000 Tetratricopeptide-like repeats in type-III-secretion chaperones and regulators. FEMS Microbiol Lett 2003;223:53-60.

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

Thioredoxin

Phosducin

MIT
11085978 Identification and characterization of SNX15, a novel sorting nexin involved in protein trafficking. J Biol Chem 2001;276:5074-5084.
16193069 Structural and mechanistic studies of VPS4 proteins. EMBO J. 2005;24:3658-3669.
16174732 Structure and ESCRT-III protein interactions of the MIT domain of human VPS4A. Proc Natl Acad Sci U S A. 2005;102:13813-13818.

Wzy_C_2

Alkyl_sulf_dimr

TPR_12

Fis1_TPR_C

BTAD
12625841 New Knowledge from Old: In silico discovery of novel protein domains in Streptomyces coelicolor. BMC Microbiol 2003;3:3-3.

TPR_4

TPR_16

TPR_9

TPR_8

TPR_7

TPR_6

Domain	Description	Evalue	Bits	GA	Start	End
Alkyl_sulf_dimr	Alkyl sulfatase dimerisation	5.7E-06	18	26.00	199	264
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.00027	12	27.20	201	266
NARP1	NMDA receptor-regulated protein 1	0.00029	11	21.80	202	286
Wzy_C_2	Virulence factor membrane-bound polymerase, C-terminal	0.00017	12	28.50	212	266
TPR_14	Tetratricopeptide repeat	4.2E-07	21	23.50	215	248
TPR_12	Tetratricopeptide repeat	3.6E-06	18	30.10	217	265
TPR_2	Tetratricopeptide repeat	8.2E-09	26	22.40	217	244
TPR_6	Tetratricopeptide repeat	0.0016	10	26.30	217	243
TPR_10	Tetratricopeptide repeat	0.00035	11	27.50	218	240
TPR_11	TPR repeat	8E-12	36	26.80	218	259
TPR_16	Tetratricopeptide repeat	1.8E-11	36	32.70	218	278
TPR_4	Tetratricopeptide repeat	0.1	5	22.00	219	236
TPR_15	Tetratricopeptide repeat	0.00042	10	26.20	219	302
TPR_3	Tetratricopeptide repeat	0.0079	7	20.70	220	235
BTAD	Bacterial transcriptional activator domain	0.21	3	21.00	221	238
TPR_9	Tetratricopeptide repeat	2.3E-06	19	35.00	221	270
TPR_1	Tetratricopeptide repeat	1.7E-06	19	20.40	222	244
Fis1_TPR_C	Fis1 C-terminal tetratricopeptide repeat	0.0066	8	25.30	222	244
MIT	MIT (microtubule interacting and transport) domain	0.0037	8	28.30	223	239
TPR_8	Tetratricopeptide repeat	0.00019	13	25.70	223	244
TPR_7	Tetratricopeptide repeat	0.0009	10	27.90	223	245
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.00036	12	27.20	224	303
TPR_19	Tetratricopeptide repeat	9.8E-10	30	25.00	224	282
TPR_17	Tetratricopeptide repeat	1.7E-05	16	24.40	233	265
TPR_20	Tetratricopeptide repeat	1.8E-05	16	25.00	234	293
TPR_4	Tetratricopeptide repeat	0.0002	13	22.00	245	264
TPR_10	Tetratricopeptide repeat	0.00062	11	27.50	248	274
TPR_2	Tetratricopeptide repeat	8.4E-06	17	22.40	248	277
TPR_1	Tetratricopeptide repeat	0.00015	13	20.40	249	278
TPR_12	Tetratricopeptide repeat	0.0003	12	30.10	249	302
DUF3856	Domain of Unknown Function (DUF3856)	0.42	2	27.00	250	268
BTAD	Bacterial transcriptional activator domain	0.0042	8	21.00	250	298
TPR_8	Tetratricopeptide repeat	0.02	6	25.70	251	277
TPR_14	Tetratricopeptide repeat	1.1E-05	17	23.50	251	288
Alkyl_sulf_dimr	Alkyl sulfatase dimerisation	0.03	6	26.00	252	297
TPR_11	TPR repeat	2.8E-08	24	26.80	255	293
TPR_17	Tetratricopeptide repeat	5.5E-07	21	24.40	268	299
TPR_19	Tetratricopeptide repeat	0.0024	9	25.00	275	302
TPR_16	Tetratricopeptide repeat	0.082	5	32.70	275	301
TPR_9	Tetratricopeptide repeat	0.27	2	35.00	275	317
TPR_8	Tetratricopeptide repeat	0.00083	11	25.70	279	299
TPR_1	Tetratricopeptide repeat	0.03	5	20.40	279	300
TPR_2	Tetratricopeptide repeat	0.0046	8	22.40	279	302
TPR_14	Tetratricopeptide repeat	0.0037	9	23.50	280	302
TPR_4	Tetratricopeptide repeat	0.15	4	22.00	280	302
TPR_7	Tetratricopeptide repeat	0.041	5	27.90	282	300
TPR_6	Tetratricopeptide repeat	0.2	4	26.30	284	301
DUF3856	Domain of Unknown Function (DUF3856)	0.00081	10	27.00	399	476
TPR_15	Tetratricopeptide repeat	0.37	1	26.20	401	436
TPR_2	Tetratricopeptide repeat	0.0046	8	22.40	402	432
TPR_8	Tetratricopeptide repeat	0.36	2	25.70	405	432
TPR_12	Tetratricopeptide repeat	0.041	5	30.10	408	445
TPR_14	Tetratricopeptide repeat	0.81	2	23.50	409	428
TPR_19	Tetratricopeptide repeat	0.87	1	25.00	409	438
TPR_11	TPR repeat	0.034	5	26.80	411	435
TPR_1	Tetratricopeptide repeat	0.095	4	20.40	413	435
TPR_7	Tetratricopeptide repeat	0.39	2	27.90	414	430
TPR_2	Tetratricopeptide repeat	0.0052	8	22.40	454	479
TPR_1	Tetratricopeptide repeat	0.0016	9	20.40	455	479
TPR_16	Tetratricopeptide repeat	0.023	6	32.70	455	515
TPR_11	TPR repeat	3.3E-06	18	26.80	456	497
TPR_8	Tetratricopeptide repeat	0.2	3	25.70	456	481
TPR_3	Tetratricopeptide repeat	0.65	1	20.70	458	472
TPR_17	Tetratricopeptide repeat	0.0029	9	24.40	472	499
DUF3856	Domain of Unknown Function (DUF3856)	0.094	4	27.00	478	512
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.004	8	27.20	485	538
TPR_1	Tetratricopeptide repeat	3.4E-10	30	20.40	485	516
TPR_2	Tetratricopeptide repeat	9.9E-07	20	22.40	485	515
TPR_12	Tetratricopeptide repeat	3.9E-05	15	30.10	485	541
TPR_8	Tetratricopeptide repeat	0.088	4	25.70	486	515
TPR_7	Tetratricopeptide repeat	0.0033	9	27.90	486	511
BTAD	Bacterial transcriptional activator domain	0.0047	8	21.00	490	550
Fis1_TPR_C	Fis1 C-terminal tetratricopeptide repeat	0.78	1	25.30	494	519
TPR_11	TPR repeat	7.7E-05	13	26.80	494	531
TPR_14	Tetratricopeptide repeat	0.054	6	23.50	495	524
TPR_9	Tetratricopeptide repeat	0.0022	9	35.00	499	548
TPR_17	Tetratricopeptide repeat	0.0073	8	24.40	506	537
TPR_19	Tetratricopeptide repeat	0.00086	11	25.00	507	557
TPR_14	Tetratricopeptide repeat	0.05	6	23.50	518	554
TPR_2	Tetratricopeptide repeat	4.8E-05	14	22.40	518	548
TPR_1	Tetratricopeptide repeat	1.2E-05	16	20.40	518	541
TPR_15	Tetratricopeptide repeat	0.13	2	26.20	518	556
TPR_4	Tetratricopeptide repeat	0.15	4	22.00	519	538
TPR_6	Tetratricopeptide repeat	1.1E-05	17	26.30	519	549
TPR_7	Tetratricopeptide repeat	0.0037	8	27.90	519	541
TPR_16	Tetratricopeptide repeat	0.0081	8	32.70	522	555
NARP1	NMDA receptor-regulated protein 1	0.15	2	21.80	523	567
TPR_10	Tetratricopeptide repeat	0.031	5	27.50	524	541
TPR_11	TPR repeat	0.28	2	26.80	529	541
Phosducin	Phosducin	1.7E-06	18	20.30	537	678
Thioredoxin	Thioredoxin	7.3E-10	30	22.10	613	669