c2pfam

AT3G61360.1 :

Domain Description Evalue Bits GA Start End
Leuk-A4-hydro_C Leukotriene A4 hydrolase, C-terminal 0.15 2 21.20 82 132
PPR_long Pentacotripeptide-repeat region of PRORP 0.081 2 27.00 95 168
ATP13 Mitochondrial ATPase expression 0.00068 9 26.70 95 137
PPR_2 PPR repeat family 0.13 2 30.00 110 131
PPR PPR repeat 0.056 4 25.00 144 167
Leuk-A4-hydro_C Leukotriene A4 hydrolase, C-terminal 0.0013 9 21.20 152 213
PPR_3 Pentatricopeptide repeat domain 0.001 9 25.00 174 217
PPR_1 PPR repeat 0.00011 12 23.80 179 201
PPR PPR repeat 7.6E-06 16 25.00 179 204
PPR_2 PPR repeat family 2.6E-08 24 30.00 179 217
PPR_long Pentacotripeptide-repeat region of PRORP 0.0014 8 27.00 192 287
PPR_1 PPR repeat 0.12 2 23.80 206 236
PPR_3 Pentatricopeptide repeat domain 3.6E-05 13 25.00 206 249
PPR_2 PPR repeat family 2.6E-15 46 30.00 208 257
Ribonuc_red_lgN Ribonucleotide reductase, all-alpha domain 0.011 5 22.80 209 247
PPR PPR repeat 0.0015 9 25.00 212 241
Mtf2 Mtf2 family 0.42 0 27.00 223 250
YozD YozD-like protein 4E-05 14 27.00 229 244
PPR_1 PPR repeat 2.5E-12 36 23.80 239 271
PPR PPR repeat 6E-09 26 25.00 246 274
PPR_2 PPR repeat family 1.9E-07 21 30.00 252 289
PPR_long Pentacotripeptide-repeat region of PRORP 1.4E-06 17 27.00 263 350
PPR_3 Pentatricopeptide repeat domain 4.9E-11 32 25.00 266 323
PPR_1 PPR repeat 0.46 0 23.80 284 305
PPR_2 PPR repeat family 0.00069 10 30.00 284 314
PPR PPR repeat 0.00055 10 25.00 284 311
PPR_3 Pentatricopeptide repeat domain 2.5E-12 36 25.00 302 356
ATP13 Mitochondrial ATPase expression 0.0069 6 26.70 303 342
PPR_1 PPR repeat 1.6E-08 24 23.80 309 342
PPR_2 PPR repeat family 1.3E-16 50 30.00 313 361
PPR PPR repeat 6.4E-10 29 25.00 317 346
Mtf2 Mtf2 family 0.00015 11 27.00 317 353
Exog_C Endo/exonuclease (EXOG) C-terminal domain 3.3E-05 13 29.50 336 350
PPR_1 PPR repeat 0.012 5 23.80 344 355
PPR_long Pentacotripeptide-repeat region of PRORP 0.00019 10 27.00 366 454
PPR PPR repeat 0.69 0 25.00 371 382
PPR_2 PPR repeat family 0.095 3 30.00 371 394
Ribonuc_red_lgN Ribonucleotide reductase, all-alpha domain 0.037 4 22.80 372 391
PPR_3 Pentatricopeptide repeat domain 0.96 -1 25.00 376 397
ATP13 Mitochondrial ATPase expression 0.072 3 26.70 378 410
PPR_2 PPR repeat family 8.6E-06 16 30.00 392 420
PPR PPR repeat 4.7E-05 13 25.00 393 417
PPR_1 PPR repeat 0.089 2 23.80 393 413

498

Leuk-A4-hydro_C
PPR_long
ATP13
PPR_2
PPR
Leuk-A4-hydro_C
PPR_3
PPR_1
PPR
PPR_2
PPR_long
PPR_1
PPR_3
PPR_2
Ribonuc_red_lgN
PPR
Mtf2
YozD
PPR_1
PPR
PPR_2
PPR_long
PPR_3
PPR_1
PPR_2
PPR
PPR_3
ATP13
PPR_1
PPR_2
PPR
Mtf2
Exog_C
PPR_1
PPR_long
PPR
PPR_2
Ribonuc_red_lgN
PPR_3
ATP13
PPR_2
PPR
PPR_1

References:

Mtf2

Exog_C

Ribonuc_red_lgN
8052308 Structure of ribonucleotide reductase protein R1. Nature 1994;370:533-539.

ATP13

Leuk-A4-hydro_C
11175901 Crystal structure of human leukotriene A(4) hydrolase, a bifunctional enzyme in inflammation. Nat Struct Biol. 2001;8:131-135.

YozD

PPR_long

PPR_3

PPR_2

PPR_1

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.

Domain	Description	Evalue	Bits	GA	Start	End
Leuk-A4-hydro_C	Leukotriene A4 hydrolase, C-terminal	0.15	2	21.20	82	132
PPR_long	Pentacotripeptide-repeat region of PRORP	0.081	2	27.00	95	168
ATP13	Mitochondrial ATPase expression	0.00068	9	26.70	95	137
PPR_2	PPR repeat family	0.13	2	30.00	110	131
PPR	PPR repeat	0.056	4	25.00	144	167
Leuk-A4-hydro_C	Leukotriene A4 hydrolase, C-terminal	0.0013	9	21.20	152	213
PPR_3	Pentatricopeptide repeat domain	0.001	9	25.00	174	217
PPR_1	PPR repeat	0.00011	12	23.80	179	201
PPR	PPR repeat	7.6E-06	16	25.00	179	204
PPR_2	PPR repeat family	2.6E-08	24	30.00	179	217
PPR_long	Pentacotripeptide-repeat region of PRORP	0.0014	8	27.00	192	287
PPR_1	PPR repeat	0.12	2	23.80	206	236
PPR_3	Pentatricopeptide repeat domain	3.6E-05	13	25.00	206	249
PPR_2	PPR repeat family	2.6E-15	46	30.00	208	257
Ribonuc_red_lgN	Ribonucleotide reductase, all-alpha domain	0.011	5	22.80	209	247
PPR	PPR repeat	0.0015	9	25.00	212	241
Mtf2	Mtf2 family	0.42	0	27.00	223	250
YozD	YozD-like protein	4E-05	14	27.00	229	244
PPR_1	PPR repeat	2.5E-12	36	23.80	239	271
PPR	PPR repeat	6E-09	26	25.00	246	274
PPR_2	PPR repeat family	1.9E-07	21	30.00	252	289
PPR_long	Pentacotripeptide-repeat region of PRORP	1.4E-06	17	27.00	263	350
PPR_3	Pentatricopeptide repeat domain	4.9E-11	32	25.00	266	323
PPR_1	PPR repeat	0.46	0	23.80	284	305
PPR_2	PPR repeat family	0.00069	10	30.00	284	314
PPR	PPR repeat	0.00055	10	25.00	284	311
PPR_3	Pentatricopeptide repeat domain	2.5E-12	36	25.00	302	356
ATP13	Mitochondrial ATPase expression	0.0069	6	26.70	303	342
PPR_1	PPR repeat	1.6E-08	24	23.80	309	342
PPR_2	PPR repeat family	1.3E-16	50	30.00	313	361
PPR	PPR repeat	6.4E-10	29	25.00	317	346
Mtf2	Mtf2 family	0.00015	11	27.00	317	353
Exog_C	Endo/exonuclease (EXOG) C-terminal domain	3.3E-05	13	29.50	336	350
PPR_1	PPR repeat	0.012	5	23.80	344	355
PPR_long	Pentacotripeptide-repeat region of PRORP	0.00019	10	27.00	366	454
PPR	PPR repeat	0.69	0	25.00	371	382
PPR_2	PPR repeat family	0.095	3	30.00	371	394
Ribonuc_red_lgN	Ribonucleotide reductase, all-alpha domain	0.037	4	22.80	372	391
PPR_3	Pentatricopeptide repeat domain	0.96	-1	25.00	376	397
ATP13	Mitochondrial ATPase expression	0.072	3	26.70	378	410
PPR_2	PPR repeat family	8.6E-06	16	30.00	392	420
PPR	PPR repeat	4.7E-05	13	25.00	393	417
PPR_1	PPR repeat	0.089	2	23.80	393	413