c2pfam

AT3G61450.1 :

Domain Description Evalue Bits GA Start End
Syntaxin-6_N Syntaxin 6, N-terminal 0.00013 13 24.90 9 120
ISG65-75 Invariant surface glycoprotein 0.056 3 20.60 9 71
Fzo_mitofusin fzo-like conserved region 0.0027 7 23.70 35 82
LUC7 LUC7 N_terminus 0.34 0 33.00 37 78
Spc7 Spc7 kinetochore protein 0.012 4 34.00 40 115
Grg1 Glucose-repressible protein Grg1 0.00034 11 25.00 41 73
DUF948 Bacterial protein of unknown function (DUF948) 0.18 2 28.10 41 63
DUF2203 Uncharacterized conserved protein (DUF2203) 0.0055 7 20.80 42 99
ApoLp-III Apolipophorin-III precursor (apoLp-III) 0.42 1 31.00 55 85
EzrA Septation ring formation regulator, EzrA 0.019 3 30.00 57 109
APG17 Autophagy protein Apg17 0.49 -1 25.00 60 81
NPV_P10 Nucleopolyhedrovirus P10 protein 0.07 4 29.80 92 121
EzrA Septation ring formation regulator, EzrA 0.00014 10 30.00 160 237
LUC7 LUC7 N_terminus 0.00042 10 33.00 162 222
APG17 Autophagy protein Apg17 2.8E-06 17 25.00 164 238
Fzo_mitofusin fzo-like conserved region 0.014 5 23.70 164 202
ISG65-75 Invariant surface glycoprotein 0.00073 9 20.60 177 237
NPV_P10 Nucleopolyhedrovirus P10 protein 0.00053 10 29.80 179 217
DUF948 Bacterial protein of unknown function (DUF948) 0.0048 7 28.10 182 211
ApoLp-III Apolipophorin-III precursor (apoLp-III) 0.00017 12 31.00 184 237
Spc7 Spc7 kinetochore protein 0.00012 11 34.00 186 239
DUF948 Bacterial protein of unknown function (DUF948) 0.0079 7 28.10 186 211
DUF2203 Uncharacterized conserved protein (DUF2203) 0.015 6 20.80 187 231
Grg1 Glucose-repressible protein Grg1 0.36 1 25.00 190 218
Syntaxin-6_N Syntaxin 6, N-terminal 0.022 5 24.90 190 236
XhlA Haemolysin XhlA 0.00011 12 29.10 195 230
SNARE SNARE domain 2.6E-13 40 30.00 206 255
Fzo_mitofusin fzo-like conserved region 0.5 0 23.70 208 238

263

Syntaxin-6_N
ISG65-75
Fzo_mitofusin
LUC7
Spc7
Grg1
DUF948
DUF2203
ApoLp-III
EzrA
APG17
NPV_P10
EzrA
LUC7
APG17
Fzo_mitofusin
ISG65-75
NPV_P10
DUF948
ApoLp-III
Spc7
DUF948
DUF2203
Grg1
Syntaxin-6_N
XhlA
SNARE
Fzo_mitofusin

References:

NPV_P10
9634101 The single-nucleocapsid nucleopolyhedrovirus of Buzura suppressaria encodes a P10 protein. J Gen Virol 1998;79:1553-1562.

APG17

DUF948

Syntaxin-6_N
12082176 Three-dimensional structure of the amino-terminal domain of syntaxin 6, a SNAP-25 C homolog. Proc Natl Acad Sci U S A. 2002;99:9184-9189.

Fzo_mitofusin
9230308 Developmentally regulated mitochondrial fusion mediated by a conserved, novel, predicted GTPase. Cell 1997;90:121-129.
11181170 Control of mitochondrial morphology by a human mitofusin. J Cell Sci 2001;114:867-874.

SNARE
9096343 A conserved domain is present in different families of vesicular fusion proteins: a new superfamily. Proc Natl Acad Sci U S A 1997;94:3046-3051.

ApoLp-III
11818551 Structural basis for the conformational adaptability of apolipophorin III, a helix-bundle exchangeable apolipoprotein. Proc Natl Acad Sci U S A 2002;99:1188-1193.

Grg1

ISG65-75
1587856 Molecular characterization of two invariant surface glycoproteins specific for the bloodstream stage of Trypanosoma brucei. J Biol Chem. 1992;267:10797-10803.
18538880 Heterologous expression, purification and characterisation of the extracellular domain of trypanosome invariant surface glycoprotein ISG75. J Biotechnol. 2008;135:247-254.

XhlA
15659065 Expression and activity of a Xenorhabdus nematophila haemolysin required for full virulence towards Manduca sexta insects. Cell Microbiol. 2005;7:209-219.

DUF2203

LUC7
11804584 Composition and functional characterization of the yeast spliceosomal penta-snRNP. Mol Cell 2002;9:31-44.
10500099 Luc7p, a novel yeast U1 snRNP protein with a role in 5' splice site recognition. Genes Dev 1999;13:2425-2438.
11170747 Characterization of a widely expressed gene (LUC7-LIKE; LUC7L) defining the centromeric boundary of the human alpha-globin domain. Genomics 2001;71:307-314.
10631324 CROP/Luc7A, a novel serine/arginine-rich nuclear protein, isolated from cisplatin-resistant cell line. FEBS Lett 2000;465:153-156.

Spc7
15371542 The fission yeast kinetochore component Spc7 associates with the EB1 family member Mal3 and is required for kinetochore-spindle association. Mol Biol Cell 2004;15:5255-5267.

EzrA
10449747 Identification and characterization of a negative regulator of FtsZ ring formation in Bacillus subtilis. Proc Natl Acad Sci U S A 1999;96:9642-9647.

Domain	Description	Evalue	Bits	GA	Start	End
Syntaxin-6_N	Syntaxin 6, N-terminal	0.00013	13	24.90	9	120
ISG65-75	Invariant surface glycoprotein	0.056	3	20.60	9	71
Fzo_mitofusin	fzo-like conserved region	0.0027	7	23.70	35	82
LUC7	LUC7 N_terminus	0.34	0	33.00	37	78
Spc7	Spc7 kinetochore protein	0.012	4	34.00	40	115
Grg1	Glucose-repressible protein Grg1	0.00034	11	25.00	41	73
DUF948	Bacterial protein of unknown function (DUF948)	0.18	2	28.10	41	63
DUF2203	Uncharacterized conserved protein (DUF2203)	0.0055	7	20.80	42	99
ApoLp-III	Apolipophorin-III precursor (apoLp-III)	0.42	1	31.00	55	85
EzrA	Septation ring formation regulator, EzrA	0.019	3	30.00	57	109
APG17	Autophagy protein Apg17	0.49	-1	25.00	60	81
NPV_P10	Nucleopolyhedrovirus P10 protein	0.07	4	29.80	92	121
EzrA	Septation ring formation regulator, EzrA	0.00014	10	30.00	160	237
LUC7	LUC7 N_terminus	0.00042	10	33.00	162	222
APG17	Autophagy protein Apg17	2.8E-06	17	25.00	164	238
Fzo_mitofusin	fzo-like conserved region	0.014	5	23.70	164	202
ISG65-75	Invariant surface glycoprotein	0.00073	9	20.60	177	237
NPV_P10	Nucleopolyhedrovirus P10 protein	0.00053	10	29.80	179	217
DUF948	Bacterial protein of unknown function (DUF948)	0.0048	7	28.10	182	211
ApoLp-III	Apolipophorin-III precursor (apoLp-III)	0.00017	12	31.00	184	237
Spc7	Spc7 kinetochore protein	0.00012	11	34.00	186	239
DUF948	Bacterial protein of unknown function (DUF948)	0.0079	7	28.10	186	211
DUF2203	Uncharacterized conserved protein (DUF2203)	0.015	6	20.80	187	231
Grg1	Glucose-repressible protein Grg1	0.36	1	25.00	190	218
Syntaxin-6_N	Syntaxin 6, N-terminal	0.022	5	24.90	190	236
XhlA	Haemolysin XhlA	0.00011	12	29.10	195	230
SNARE	SNARE domain	2.6E-13	40	30.00	206	255
Fzo_mitofusin	fzo-like conserved region	0.5	0	23.70	208	238