c2pfam

AT3G61550.1 :

Domain Description Evalue Bits GA Start End
FANCL_C FANCL C-terminal domain 0.00062 10 20.70 133 170
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 2.2E-05 15 27.00 133 179
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 2.7E-05 14 27.30 135 176
zf-RING_10 zinc RING finger of MSL2 8.4E-05 13 31.00 135 179
zf-RING_2 Ring finger domain 9.1E-15 45 27.30 135 178
zf-RING_UBOX RING-type zinc-finger 1.8E-06 18 25.20 136 175
zf-RING_11 RING-like zinc finger 1.8E-10 31 27.00 136 164
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 5.8E-09 26 27.00 136 177
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 8.4E-09 26 21.00 136 177
zf-RING_5 zinc-RING finger domain 4.7E-08 23 27.90 136 179
zf-RING_4 RING/Ubox like zinc-binding domain 0.001 9 27.00 136 179
Prok-RING_4 Prokaryotic RING finger family 4 0.0021 8 27.00 136 179
PHD PHD-finger 0.0074 7 27.90 136 169
RINGv RING-variant domain 7.7E-06 16 21.60 136 177
zf-C2HC5 Putative zinc finger motif, C2HC5-type 0.0009 10 23.50 138 185
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 5.6E-07 20 21.40 140 179
zf-rbx1 RING-H2 zinc finger domain 1.4E-10 32 31.00 141 178
zf-P11 P-11 zinc finger 0.00076 10 24.90 154 184
zf-RING_UBOX RING-type zinc-finger 0.21 2 25.20 174 184

212

FANCL_C
zf-C3HC4_3
Zn_ribbon_17
zf-RING_10
zf-RING_2
zf-RING_UBOX
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_4
Prok-RING_4
PHD
RINGv
zf-C2HC5
zf-ANAPC11
zf-rbx1
zf-P11
zf-RING_UBOX

References:

FANCL_C
16474167 The WD40 repeats of FANCL are required for Fanconi anemia core complex assembly. J Biol Chem. 2006;281:10896-10905.

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-C2HC5

zf-C3HC4_2

RINGv

zf-ANAPC11

zf-RING_UBOX

zf-RING_5

zf-RING_4

zf-RING_2

zf-rbx1

zf-RING_11

zf-RING_10

zf-C3HC4_3

Prok-RING_4

zf-P11

Zn_ribbon_17

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

Domain	Description	Evalue	Bits	GA	Start	End
FANCL_C	FANCL C-terminal domain	0.00062	10	20.70	133	170
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	2.2E-05	15	27.00	133	179
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	2.7E-05	14	27.30	135	176
zf-RING_10	zinc RING finger of MSL2	8.4E-05	13	31.00	135	179
zf-RING_2	Ring finger domain	9.1E-15	45	27.30	135	178
zf-RING_UBOX	RING-type zinc-finger	1.8E-06	18	25.20	136	175
zf-RING_11	RING-like zinc finger	1.8E-10	31	27.00	136	164
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	5.8E-09	26	27.00	136	177
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	8.4E-09	26	21.00	136	177
zf-RING_5	zinc-RING finger domain	4.7E-08	23	27.90	136	179
zf-RING_4	RING/Ubox like zinc-binding domain	0.001	9	27.00	136	179
Prok-RING_4	Prokaryotic RING finger family 4	0.0021	8	27.00	136	179
PHD	PHD-finger	0.0074	7	27.90	136	169
RINGv	RING-variant domain	7.7E-06	16	21.60	136	177
zf-C2HC5	Putative zinc finger motif, C2HC5-type	0.0009	10	23.50	138	185
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	5.6E-07	20	21.40	140	179
zf-rbx1	RING-H2 zinc finger domain	1.4E-10	32	31.00	141	178
zf-P11	P-11 zinc finger	0.00076	10	24.90	154	184
zf-RING_UBOX	RING-type zinc-finger	0.21	2	25.20	174	184