c2pfam

AT1G17680.1 :

Domain Description Evalue Bits GA Start End
RIG-I_C RIG-I receptor C-terminal domain 0.049 4 23.20 136 181
TPR_20 Tetratricopeptide repeat 0.023 6 25.00 151 185
TPR_14 Tetratricopeptide repeat 0.065 5 23.50 159 194
TPR_10 Tetratricopeptide repeat 0.64 1 27.50 159 179
TPR_19 Tetratricopeptide repeat 0.04 5 25.00 170 203
TPR_16 Tetratricopeptide repeat 0.56 2 32.70 171 203
TPR_17 Tetratricopeptide repeat 0.54 2 24.40 178 203
TPR_2 Tetratricopeptide repeat 1 1 22.40 188 203
TPR_14 Tetratricopeptide repeat 0.0085 8 23.50 224 263
TPR_9 Tetratricopeptide repeat 3E-05 15 35.00 232 291
TPR_19 Tetratricopeptide repeat 7E-09 27 25.00 233 281
TPR_16 Tetratricopeptide repeat 0.00053 11 32.70 233 280
TPR_8 Tetratricopeptide repeat 0.27 2 25.70 234 254
TPR_2 Tetratricopeptide repeat 0.089 4 22.40 234 254
TPR_15 Tetratricopeptide repeat 0.048 3 26.20 234 274
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.0031 8 27.20 240 281
TPR_20 Tetratricopeptide repeat 5E-06 17 25.00 245 284
TPR_17 Tetratricopeptide repeat 0.0039 8 24.40 246 274
TPR_8 Tetratricopeptide repeat 0.00035 11 25.70 257 286
TPR_14 Tetratricopeptide repeat 3E-05 15 23.50 258 292
SNAP Soluble NSF attachment protein, SNAP 0.00064 10 25.00 258 303
TPR_6 Tetratricopeptide repeat 0.048 5 26.30 259 286
TPR_2 Tetratricopeptide repeat 0.00011 13 22.40 259 287
TPR_12 Tetratricopeptide repeat 0.0098 7 30.10 260 286
TPR_7 Tetratricopeptide repeat 0.00075 10 27.90 262 280
TPR_1 Tetratricopeptide repeat 0.029 5 20.40 264 286
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.0053 8 27.20 270 344
TPR_15 Tetratricopeptide repeat 0.15 2 26.20 273 422
TPR_14 Tetratricopeptide repeat 0.68 2 23.50 327 352
TPR_7 Tetratricopeptide repeat 0.33 2 27.90 328 347
TPR_12 Tetratricopeptide repeat 0.068 4 30.10 330 384
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.37 2 27.20 331 386
TPR_1 Tetratricopeptide repeat 0.77 0 20.40 331 347
TPR_19 Tetratricopeptide repeat 0.0057 8 25.00 342 393
Coatomer_E Coatomer epsilon subunit 0.00086 9 20.40 364 423
BTAD Bacterial transcriptional activator domain 0.0032 8 21.00 400 467
TPR_2 Tetratricopeptide repeat 0.012 7 22.40 400 426
TPR_8 Tetratricopeptide repeat 0.00095 10 25.70 400 426
TPR_1 Tetratricopeptide repeat 0.00078 10 20.40 402 425
TPR_14 Tetratricopeptide repeat 0.24 3 23.50 402 426
TPR_10 Tetratricopeptide repeat 0.0013 9 27.50 402 425
TPR_12 Tetratricopeptide repeat 0.16 3 30.10 403 425
TPR_7 Tetratricopeptide repeat 0.06 4 27.90 403 426
TPR_16 Tetratricopeptide repeat 0.79 1 32.70 403 427
TPR_19 Tetratricopeptide repeat 0.0028 9 25.00 412 453
SNAP Soluble NSF attachment protein, SNAP 0.018 5 25.00 412 459
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.00061 11 27.20 432 488
TPR_6 Tetratricopeptide repeat 0.092 4 26.30 435 460
TPR_12 Tetratricopeptide repeat 0.016 6 30.10 435 485
TPR_8 Tetratricopeptide repeat 0.0013 10 25.70 435 458
TPR_2 Tetratricopeptide repeat 0.24 3 22.40 436 458
TPR_7 Tetratricopeptide repeat 0.0047 8 27.90 437 463
TPR_1 Tetratricopeptide repeat 0.00033 11 20.40 437 458
TPR_15 Tetratricopeptide repeat 0.0038 7 26.20 437 485
TPR_19 Tetratricopeptide repeat 6.2E-06 17 25.00 448 502
TPR_20 Tetratricopeptide repeat 0.12 3 25.00 458 485
TPR_17 Tetratricopeptide repeat 0.85 1 24.40 465 484
TPR_10 Tetratricopeptide repeat 0.36 1 27.50 469 485
TPR_7 Tetratricopeptide repeat 0.32 2 27.90 471 485
HEPN_DZIP3 DZIP3/ hRUL138-like HEPN 5.2E-05 14 27.00 577 637
BTAD Bacterial transcriptional activator domain 7.5E-05 14 21.00 592 670
RIG-I_C RIG-I receptor C-terminal domain 0.00043 11 23.20 600 652
TPR_19 Tetratricopeptide repeat 0.04 5 25.00 617 653
TPR_1 Tetratricopeptide repeat 0.59 1 20.40 627 642
SNAP Soluble NSF attachment protein, SNAP 0.061 3 25.00 736 841
TPR_12 Tetratricopeptide repeat 0.59 1 30.10 744 787
TPR_16 Tetratricopeptide repeat 0.2 3 32.70 744 764
TPR_14 Tetratricopeptide repeat 0.98 1 23.50 745 768
TPR_2 Tetratricopeptide repeat 0.047 5 22.40 745 762
TPR_11 TPR repeat 0.0029 8 26.80 746 774
TPR_11 TPR repeat 0.56 1 26.80 801 820
TPR_17 Tetratricopeptide repeat 0.67 1 24.40 802 822
TPR_9 Tetratricopeptide repeat 0.31 2 35.00 805 841
TPR_16 Tetratricopeptide repeat 0.0021 9 32.70 808 839
TPR_1 Tetratricopeptide repeat 0.00016 12 20.40 809 840
TPR_8 Tetratricopeptide repeat 0.0003 12 25.70 809 840
TPR_2 Tetratricopeptide repeat 0.00013 13 22.40 809 840
TPR_14 Tetratricopeptide repeat 0.12 4 23.50 809 842
TPR_6 Tetratricopeptide repeat 0.00075 11 26.30 809 838
TPR_12 Tetratricopeptide repeat 0.0001 13 30.10 810 840
TPR_10 Tetratricopeptide repeat 5.4E-05 14 27.50 810 840
TPR_7 Tetratricopeptide repeat 3.3E-05 14 27.90 810 842
TPR_20 Tetratricopeptide repeat 0.56 1 25.00 858 893

896

RIG-I_C
TPR_20
TPR_14
TPR_10
TPR_19
TPR_16
TPR_17
TPR_2
TPR_14
TPR_9
TPR_19
TPR_16
TPR_8
TPR_2
TPR_15
ANAPC3
TPR_20
TPR_17
TPR_8
TPR_14
SNAP
TPR_6
TPR_2
TPR_12
TPR_7
TPR_1
ANAPC3
TPR_15
TPR_14
TPR_7
TPR_12
ANAPC3
TPR_1
TPR_19
Coatomer_E
BTAD
TPR_2
TPR_8
TPR_1
TPR_14
TPR_10
TPR_12
TPR_7
TPR_16
TPR_19
SNAP
ANAPC3
TPR_6
TPR_12
TPR_8
TPR_2
TPR_7
TPR_1
TPR_15
TPR_19
TPR_20
TPR_17
TPR_10
TPR_7
HEPN_DZIP3
BTAD
RIG-I_C
TPR_19
TPR_1
SNAP
TPR_12
TPR_16
TPR_14
TPR_2
TPR_11
TPR_11
TPR_17
TPR_9
TPR_16
TPR_1
TPR_8
TPR_2
TPR_14
TPR_6
TPR_12
TPR_10
TPR_7
TPR_20

References:

TPR_7

TPR_6

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_20

TPR_19

TPR_17

TPR_16

TPR_15

TPR_14

TPR_12

TPR_11

TPR_10

HEPN_DZIP3

Coatomer_E
10469566 Segregation of COPI-rich and anterograde-cargo-rich domains in endoplasmic-reticulum-to-Golgi transport complexes. Curr Biol 1999;9:821-824.

ANAPC3

BTAD
12625841 New Knowledge from Old: In silico discovery of novel protein domains in Streptomyces coelicolor. BMC Microbiol 2003;3:3-3.

SNAP

RIG-I_C

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_9

TPR_8

Domain	Description	Evalue	Bits	GA	Start	End
RIG-I_C	RIG-I receptor C-terminal domain	0.049	4	23.20	136	181
TPR_20	Tetratricopeptide repeat	0.023	6	25.00	151	185
TPR_14	Tetratricopeptide repeat	0.065	5	23.50	159	194
TPR_10	Tetratricopeptide repeat	0.64	1	27.50	159	179
TPR_19	Tetratricopeptide repeat	0.04	5	25.00	170	203
TPR_16	Tetratricopeptide repeat	0.56	2	32.70	171	203
TPR_17	Tetratricopeptide repeat	0.54	2	24.40	178	203
TPR_2	Tetratricopeptide repeat	1	1	22.40	188	203
TPR_14	Tetratricopeptide repeat	0.0085	8	23.50	224	263
TPR_9	Tetratricopeptide repeat	3E-05	15	35.00	232	291
TPR_19	Tetratricopeptide repeat	7E-09	27	25.00	233	281
TPR_16	Tetratricopeptide repeat	0.00053	11	32.70	233	280
TPR_8	Tetratricopeptide repeat	0.27	2	25.70	234	254
TPR_2	Tetratricopeptide repeat	0.089	4	22.40	234	254
TPR_15	Tetratricopeptide repeat	0.048	3	26.20	234	274
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.0031	8	27.20	240	281
TPR_20	Tetratricopeptide repeat	5E-06	17	25.00	245	284
TPR_17	Tetratricopeptide repeat	0.0039	8	24.40	246	274
TPR_8	Tetratricopeptide repeat	0.00035	11	25.70	257	286
TPR_14	Tetratricopeptide repeat	3E-05	15	23.50	258	292
SNAP	Soluble NSF attachment protein, SNAP	0.00064	10	25.00	258	303
TPR_6	Tetratricopeptide repeat	0.048	5	26.30	259	286
TPR_2	Tetratricopeptide repeat	0.00011	13	22.40	259	287
TPR_12	Tetratricopeptide repeat	0.0098	7	30.10	260	286
TPR_7	Tetratricopeptide repeat	0.00075	10	27.90	262	280
TPR_1	Tetratricopeptide repeat	0.029	5	20.40	264	286
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.0053	8	27.20	270	344
TPR_15	Tetratricopeptide repeat	0.15	2	26.20	273	422
TPR_14	Tetratricopeptide repeat	0.68	2	23.50	327	352
TPR_7	Tetratricopeptide repeat	0.33	2	27.90	328	347
TPR_12	Tetratricopeptide repeat	0.068	4	30.10	330	384
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.37	2	27.20	331	386
TPR_1	Tetratricopeptide repeat	0.77	0	20.40	331	347
TPR_19	Tetratricopeptide repeat	0.0057	8	25.00	342	393
Coatomer_E	Coatomer epsilon subunit	0.00086	9	20.40	364	423
BTAD	Bacterial transcriptional activator domain	0.0032	8	21.00	400	467
TPR_2	Tetratricopeptide repeat	0.012	7	22.40	400	426
TPR_8	Tetratricopeptide repeat	0.00095	10	25.70	400	426
TPR_1	Tetratricopeptide repeat	0.00078	10	20.40	402	425
TPR_14	Tetratricopeptide repeat	0.24	3	23.50	402	426
TPR_10	Tetratricopeptide repeat	0.0013	9	27.50	402	425
TPR_12	Tetratricopeptide repeat	0.16	3	30.10	403	425
TPR_7	Tetratricopeptide repeat	0.06	4	27.90	403	426
TPR_16	Tetratricopeptide repeat	0.79	1	32.70	403	427
TPR_19	Tetratricopeptide repeat	0.0028	9	25.00	412	453
SNAP	Soluble NSF attachment protein, SNAP	0.018	5	25.00	412	459
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.00061	11	27.20	432	488
TPR_6	Tetratricopeptide repeat	0.092	4	26.30	435	460
TPR_12	Tetratricopeptide repeat	0.016	6	30.10	435	485
TPR_8	Tetratricopeptide repeat	0.0013	10	25.70	435	458
TPR_2	Tetratricopeptide repeat	0.24	3	22.40	436	458
TPR_7	Tetratricopeptide repeat	0.0047	8	27.90	437	463
TPR_1	Tetratricopeptide repeat	0.00033	11	20.40	437	458
TPR_15	Tetratricopeptide repeat	0.0038	7	26.20	437	485
TPR_19	Tetratricopeptide repeat	6.2E-06	17	25.00	448	502
TPR_20	Tetratricopeptide repeat	0.12	3	25.00	458	485
TPR_17	Tetratricopeptide repeat	0.85	1	24.40	465	484
TPR_10	Tetratricopeptide repeat	0.36	1	27.50	469	485
TPR_7	Tetratricopeptide repeat	0.32	2	27.90	471	485
HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	5.2E-05	14	27.00	577	637
BTAD	Bacterial transcriptional activator domain	7.5E-05	14	21.00	592	670
RIG-I_C	RIG-I receptor C-terminal domain	0.00043	11	23.20	600	652
TPR_19	Tetratricopeptide repeat	0.04	5	25.00	617	653
TPR_1	Tetratricopeptide repeat	0.59	1	20.40	627	642
SNAP	Soluble NSF attachment protein, SNAP	0.061	3	25.00	736	841
TPR_12	Tetratricopeptide repeat	0.59	1	30.10	744	787
TPR_16	Tetratricopeptide repeat	0.2	3	32.70	744	764
TPR_14	Tetratricopeptide repeat	0.98	1	23.50	745	768
TPR_2	Tetratricopeptide repeat	0.047	5	22.40	745	762
TPR_11	TPR repeat	0.0029	8	26.80	746	774
TPR_11	TPR repeat	0.56	1	26.80	801	820
TPR_17	Tetratricopeptide repeat	0.67	1	24.40	802	822
TPR_9	Tetratricopeptide repeat	0.31	2	35.00	805	841
TPR_16	Tetratricopeptide repeat	0.0021	9	32.70	808	839
TPR_1	Tetratricopeptide repeat	0.00016	12	20.40	809	840
TPR_8	Tetratricopeptide repeat	0.0003	12	25.70	809	840
TPR_2	Tetratricopeptide repeat	0.00013	13	22.40	809	840
TPR_14	Tetratricopeptide repeat	0.12	4	23.50	809	842
TPR_6	Tetratricopeptide repeat	0.00075	11	26.30	809	838
TPR_12	Tetratricopeptide repeat	0.0001	13	30.10	810	840
TPR_10	Tetratricopeptide repeat	5.4E-05	14	27.50	810	840
TPR_7	Tetratricopeptide repeat	3.3E-05	14	27.90	810	842
TPR_20	Tetratricopeptide repeat	0.56	1	25.00	858	893