c2pfam

AT3G18524.1 :

Domain Description Evalue Bits GA Start End
MutS_I MutS domain I 2.6E-20 62 20.60 23 128
MutS_II MutS domain II 4.8E-19 58 20.90 144 283
MutS_III MutS domain III 7.3E-37 116 22.50 300 606
Plasmid_RAQPRD Plasmid protein of unknown function (Plasmid_RAQPRD) 5E-05 12 21.10 346 399
MutS_IV MutS family domain IV 8.6E-22 66 20.80 469 563
MutS_II MutS domain II 0.68 -1 20.90 540 568
MutS_V MutS domain V 0 277 19.90 662 858
MutS_II MutS domain II 0.4 0 20.90 836 883
MutS_IV MutS family domain IV 0.78 -1 20.80 908 929

937

MutS_I
MutS_II
MutS_III
Plasmid_RAQPRD
MutS_IV
MutS_II
MutS_V
MutS_II
MutS_IV

References:

MutS_V
9722634 Domain organization and functional analysis of Thermus thermophilus MutS protein [published erratum appears in Nucleic Acids Res 1998 Oct 15;26(20):following 4789] Nucleic Acids Res 1998;26:4153-4159.
8036718 Colon cancer and DNA repair: have mismatches met their match? Trends Genet 1994;10:164-168.
8510668 The yeast gene MSH3 defines a new class of eukaryotic MutS homologues. Mol Gen Genet 1993;239:97-108.
11048710 Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA. Nature 2000;407:703-710.

MutS_IV
9722634 Domain organization and functional analysis of Thermus thermophilus MutS protein [published erratum appears in Nucleic Acids Res 1998 Oct 15;26(20):following 4789] Nucleic Acids Res 1998;26:4153-4159.
8036718 Colon cancer and DNA repair: have mismatches met their match? Trends Genet 1994;10:164-168.
8510668 The yeast gene MSH3 defines a new class of eukaryotic MutS homologues. Mol Gen Genet 1993;239:97-108.
11048710 Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA. Nature 2000;407:703-710.

MutS_III
9722634 Domain organization and functional analysis of Thermus thermophilus MutS protein [published erratum appears in Nucleic Acids Res 1998 Oct 15;26(20):following 4789] Nucleic Acids Res 1998;26:4153-4159.
8036718 Colon cancer and DNA repair: have mismatches met their match? Trends Genet 1994;10:164-168.
8510668 The yeast gene MSH3 defines a new class of eukaryotic MutS homologues. Mol Gen Genet 1993;239:97-108.
11048710 Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA. Nature 2000;407:703-710.

MutS_II
9722634 Domain organization and functional analysis of Thermus thermophilus MutS protein [published erratum appears in Nucleic Acids Res 1998 Oct 15;26(20):following 4789] Nucleic Acids Res 1998;26:4153-4159.
8036718 Colon cancer and DNA repair: have mismatches met their match? Trends Genet 1994;10:164-168.
8510668 The yeast gene MSH3 defines a new class of eukaryotic MutS homologues. Mol Gen Genet 1993;239:97-108.
11048710 Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA. Nature 2000;407:703-710.

Plasmid_RAQPRD

MutS_I
9722634 Domain organization and functional analysis of Thermus thermophilus MutS protein [published erratum appears in Nucleic Acids Res 1998 Oct 15;26(20):following 4789] Nucleic Acids Res 1998;26:4153-4159.
8036718 Colon cancer and DNA repair: have mismatches met their match? Trends Genet 1994;10:164-168.
8510668 The yeast gene MSH3 defines a new class of eukaryotic MutS homologues. Mol Gen Genet 1993;239:97-108.
11048710 Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA. Nature 2000;407:703-710.

Domain	Description	Evalue	Bits	GA	Start	End
MutS_I	MutS domain I	2.6E-20	62	20.60	23	128
MutS_II	MutS domain II	4.8E-19	58	20.90	144	283
MutS_III	MutS domain III	7.3E-37	116	22.50	300	606
Plasmid_RAQPRD	Plasmid protein of unknown function (Plasmid_RAQPRD)	5E-05	12	21.10	346	399
MutS_IV	MutS family domain IV	8.6E-22	66	20.80	469	563
MutS_II	MutS domain II	0.68	-1	20.90	540	568
MutS_V	MutS domain V	0	277	19.90	662	858
MutS_II	MutS domain II	0.4	0	20.90	836	883
MutS_IV	MutS family domain IV	0.78	-1	20.80	908	929