AT3G27925.1 :

DomainDescriptionEvalueBitsGAStartEnd
Peptidase_S32Equine arteritis virus serine endopeptidase S320.0014719.70147194
Peptidase_S46Peptidase S460.66-220.70155177
Trypsin_2Trypsin-like peptidase domain012327.60157296
TrypsinTrypsin1.1E-185720.60158317
Peptidase_S46Peptidase S460.000161020.70273297
Peptidase_S29Hepatitis C virus NS3 protease1.4E-051420.50276319
Peptidase_S32Equine arteritis virus serine endopeptidase S320.0027619.70278299
PDZ_2PDZ domain5.5E-195827.00335432
PDZ_6PDZ domain0.07327.00362372
PDZ_6PDZ domain2.6E-072027.00382421
PDZPDZ domain (Also known as DHR or GLGF)8.3E-051221.60382419
Tricorn_PDZTricorn protease PDZ domain6.7E-061625.00384427
GreA_GreBTranscription elongation factor, GreA/GreB, C-term0.000131122.20392428

 439

Peptidase_S32
Peptidase_S46
Trypsin_2
Trypsin
Peptidase_S46
Peptidase_S29
Peptidase_S32
PDZ_2
PDZ_6
PDZ_6
PDZ
Tricorn_PDZ
GreA_GreB


References:

PDZ_2

Trypsin
7845208 Families of Serine Peptidases Meth Enzymol 1994;244:19-61.
3112942 The Three Dimensional Structure of Asnl02 Trypsin: Role of Aspl02 in Serine Protease Catalysis Science 1987;237:905-909.

Trypsin_2

Tricorn_PDZ

Peptidase_S46

GreA_GreB
7854424 Crystal structure of the GreA transcript cleavage factor from Escherichia coli. Nature. 1995;373:636-640.

PDZ
9204764 PDZ domains: targeting signalling molecules to sub-membranous sites. Bioessays 1997;19:469-479.
8674113 Crystal structures of a complexed and peptide-free membrane protein-binding domain: molecular basis of peptide recognition by PDZ. Cell. 1996;85:1067-1076.
9041651 Evidence for PDZ domains in bacteria, yeast, and plants. Protein Sci 1997;6:464-468.
19738200 Rapid evolution of functional complexity in a domain family. Sci Signal. 2009;2:ra50.

Peptidase_S32
10725411 Virus-encoded proteinases and proteolytic processing in the Nidovirales. J Gen Virol 2000;81:853-879.

PDZ_6

Peptidase_S29
9568891 Complex of NS3 protease and NS4A peptide of BK strain hepatitis C virus: a 2.2 A resolution structure in a hexagonal crystal form. Protein Sci 1998;7:837-847.
8861916 The crystal structure of hepatitis C virus NS3 proteinase reveals a trypsin-like fold and a structural zinc binding site. Cell 1996;87:331-342.
9083052 Substrate specificity of the hepatitis C virus serine protease NS3. J Biol Chem 1997;272:9204-9209.