c2pfam

AT3G14415.1 :

Domain Description Evalue Bits GA Start End
FMN_dh FMN-dependent dehydrogenase 0 460 22.00 13 355
PA PA domain 0.22 1 21.30 127 127
DUF561 Protein of unknown function (DUF561) 0.0012 7 21.60 179 253
DHO_dh Dihydroorotate dehydrogenase 0.0037 6 20.30 204 248
TMP-TENI Thiamine monophosphate synthase/TENI 0.00083 8 20.80 210 252
ThiG Thiazole biosynthesis protein ThiG 0.0077 5 19.90 216 262
His_biosynth Histidine biosynthesis protein 0.12 1 22.90 219 265
DUF561 Protein of unknown function (DUF561) 0.00043 9 21.60 220 277
NMO Nitronate monooxygenase 5.2E-09 25 28.00 232 343
PA PA domain 0.00022 11 21.30 234 260
DUF561 Protein of unknown function (DUF561) 0.00024 10 21.60 254 311
TMP-TENI Thiamine monophosphate synthase/TENI 0.077 2 20.80 263 307
DHO_dh Dihydroorotate dehydrogenase 6.1E-06 15 20.30 264 314
IMPDH IMP dehydrogenase / GMP reductase domain 1E-09 27 24.00 264 311
His_biosynth Histidine biosynthesis protein 7.5E-06 15 22.90 265 312
ThiG Thiazole biosynthesis protein ThiG 1.7E-05 14 19.90 272 311
Glu_synthase Conserved region in glutamate synthase 2.3E-07 20 19.80 276 315
IMPDH IMP dehydrogenase / GMP reductase domain 0.5 -1 24.00 322 352

367

FMN_dh
PA
DUF561
DHO_dh
TMP-TENI
ThiG
His_biosynth
DUF561
NMO
PA
DUF561
TMP-TENI
DHO_dh
IMPDH
His_biosynth
ThiG
Glu_synthase
IMPDH

References:

Glu_synthase
8923741 Sequence of the GLT1 gene from Saccharomyces cerevisiae reveals the domain structure of yeast glutamate synthase. Yeast 1996;12:1359-1366.

DUF561

His_biosynth
9332345 Paralogous histidine biosynthetic genes: evolutionary analysis of the Saccharomyces cerevisiae HIS6 and HIS7 genes. Gene 1997;197:9-17.
8028028 The evolution of the histidine biosynthetic genes in prokaryotes: a common ancestor for the hisA and hisF genes. J Mol Evol 1994;38:489-495.
8028028 The evolution of the histidine biosynthetic genes in prokaryotes: a common ancestor for the hisA and hisF genes. J Mol Evol 1994;38:489-495.
11054297 Homology among (betaalpha)(8) barrels: implications for the evolution of metabolic pathways. J Mol Biol 2000;303:627-641.

NMO

ThiG
9371431 Expression of thiamin biosynthetic genes (thiCOGE) and production of symbiotic terminal oxidase cbb3 in Rhizobium etli. J Bacteriol 1997;179:6887-6893.

DHO_dh
9655329 The crystal structure of Lactococcus lactis dihydroorotate dehydrogenase A complexed with the enzyme reaction product throws light on its enzymatic function. Protein Sci 1998;7:1269-1279.

IMPDH
9271497 Crystal structure of Tritrichomonas foetus inosine-5'-monophosphate dehydrogenase and the enzyme-product complex. Biochemistry 1997;36:10666-10674.
10200156 Characteristics and crystal structure of bacterial inosine-5'-monophosphate dehydrogenase. Biochemistry 1999;38:4691-4700.

FMN_dh
2681790 Refined structure of spinach glycolate oxidase at 2 A resolution. J Mol Biol 1989;209:151-166.
2329585 Molecular structure of flavocytochrome b2 at 2.4 A resolution. J Mol Biol 1990;212:837-863.

TMP-TENI
9139923 Characterization of the Bacillus subtilis thiC operon involved in thiamine biosynthesis. J Bacteriol 1997;179:3030-3035.

PA
11246007 The protease-associated domain: a homology domain associated with multiple classes of proteases. Trends Biochem Sci 2001;26:147-148.

Domain	Description	Evalue	Bits	GA	Start	End
FMN_dh	FMN-dependent dehydrogenase	0	460	22.00	13	355
PA	PA domain	0.22	1	21.30	127	127
DUF561	Protein of unknown function (DUF561)	0.0012	7	21.60	179	253
DHO_dh	Dihydroorotate dehydrogenase	0.0037	6	20.30	204	248
TMP-TENI	Thiamine monophosphate synthase/TENI	0.00083	8	20.80	210	252
ThiG	Thiazole biosynthesis protein ThiG	0.0077	5	19.90	216	262
His_biosynth	Histidine biosynthesis protein	0.12	1	22.90	219	265
DUF561	Protein of unknown function (DUF561)	0.00043	9	21.60	220	277
NMO	Nitronate monooxygenase	5.2E-09	25	28.00	232	343
PA	PA domain	0.00022	11	21.30	234	260
DUF561	Protein of unknown function (DUF561)	0.00024	10	21.60	254	311
TMP-TENI	Thiamine monophosphate synthase/TENI	0.077	2	20.80	263	307
DHO_dh	Dihydroorotate dehydrogenase	6.1E-06	15	20.30	264	314
IMPDH	IMP dehydrogenase / GMP reductase domain	1E-09	27	24.00	264	311
His_biosynth	Histidine biosynthesis protein	7.5E-06	15	22.90	265	312
ThiG	Thiazole biosynthesis protein ThiG	1.7E-05	14	19.90	272	311
Glu_synthase	Conserved region in glutamate synthase	2.3E-07	20	19.80	276	315
IMPDH	IMP dehydrogenase / GMP reductase domain	0.5	-1	24.00	322	352