c2pfam

AT4G00090.1 :

Domain Description Evalue Bits GA Start End
LapA_dom Lipopolysaccharide assembly protein A domain 0.0002 10 28.00 6 30
WD40 WD domain, G-beta repeat 5.3E-10 29 21.00 79 113
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 4.9E-07 19 22.90 83 118
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 1.6E-08 23 29.50 83 145
Lactonase Lactonase, 7-bladed beta-propeller 0.00072 8 21.70 87 172
Nucleoporin_N Nup133 N terminal like 0.052 1 23.70 90 122
PD40 WD40-like Beta Propeller Repeat 0.053 3 20.60 94 102
WD40 WD domain, G-beta repeat 0.79 0 21.00 134 153
WD40 WD domain, G-beta repeat 0.51 1 21.00 206 224
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.17 1 22.90 206 240
Lactonase Lactonase, 7-bladed beta-propeller 5E-05 12 21.70 230 289
WD40 WD domain, G-beta repeat 0.0056 7 21.00 233 266
PD40 WD40-like Beta Propeller Repeat 0.013 5 20.60 237 255
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.0084 4 29.50 243 272
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.35 0 22.90 248 267
Nucleoporin_N Nup133 N terminal like 0.00015 9 23.70 261 321
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00021 11 22.90 280 318
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 2.5E-05 12 29.50 282 329
WD40 WD domain, G-beta repeat 1.8E-11 34 21.00 283 317
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 3.4E-05 13 22.90 350 396
WD40 WD domain, G-beta repeat 3.7E-06 17 21.00 384 422
PD40 WD40-like Beta Propeller Repeat 0.11 2 20.60 386 397

430

LapA_dom
WD40
ANAPC4_WD40
Ge1_WD40
Lactonase
Nucleoporin_N
PD40
WD40
WD40
ANAPC4_WD40
Lactonase
WD40
PD40
Ge1_WD40
ANAPC4_WD40
Nucleoporin_N
ANAPC4_WD40
Ge1_WD40
WD40
ANAPC4_WD40
WD40
PD40

References:

LapA_dom

ANAPC4_WD40

Ge1_WD40

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

PD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

Lactonase

Nucleoporin_N
15557116 Structural and functional analysis of Nup133 domains reveals modular building blocks of the nuclear pore complex. J Cell Biol. 2004;167:591-597.

Domain	Description	Evalue	Bits	GA	Start	End
LapA_dom	Lipopolysaccharide assembly protein A domain	0.0002	10	28.00	6	30
WD40	WD domain, G-beta repeat	5.3E-10	29	21.00	79	113
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	4.9E-07	19	22.90	83	118
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	1.6E-08	23	29.50	83	145
Lactonase	Lactonase, 7-bladed beta-propeller	0.00072	8	21.70	87	172
Nucleoporin_N	Nup133 N terminal like	0.052	1	23.70	90	122
PD40	WD40-like Beta Propeller Repeat	0.053	3	20.60	94	102
WD40	WD domain, G-beta repeat	0.79	0	21.00	134	153
WD40	WD domain, G-beta repeat	0.51	1	21.00	206	224
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.17	1	22.90	206	240
Lactonase	Lactonase, 7-bladed beta-propeller	5E-05	12	21.70	230	289
WD40	WD domain, G-beta repeat	0.0056	7	21.00	233	266
PD40	WD40-like Beta Propeller Repeat	0.013	5	20.60	237	255
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.0084	4	29.50	243	272
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.35	0	22.90	248	267
Nucleoporin_N	Nup133 N terminal like	0.00015	9	23.70	261	321
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00021	11	22.90	280	318
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	2.5E-05	12	29.50	282	329
WD40	WD domain, G-beta repeat	1.8E-11	34	21.00	283	317
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	3.4E-05	13	22.90	350	396
WD40	WD domain, G-beta repeat	3.7E-06	17	21.00	384	422
PD40	WD40-like Beta Propeller Repeat	0.11	2	20.60	386	397