c2pfam

AT4G00480.1 :

Domain Description Evalue Bits GA Start End
bHLH-MYC_N bHLH-MYC and R2R3-MYB transcription factors N-terminal 0 169 30.20 23 216
RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain 5.9E-05 11 21.30 196 254
bHLH-MYC_N bHLH-MYC and R2R3-MYB transcription factors N-terminal 0.23 -1 30.20 285 346
HLH Helix-loop-helix DNA-binding domain 8.8E-08 20 20.70 346 383
RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain 0.58 -2 21.30 449 449
RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain 0.22 0 21.30 459 507

526

bHLH-MYC_N
RNA_pol_A_bac
bHLH-MYC_N
HLH
RNA_pol_A_bac
RNA_pol_A_bac

References:

HLH
7553065 Transcription factors 2: helix-loop-helix. Protein Profile 1995;2:621-702.

RNA_pol_A_bac
9657722 Structure of the Escherichia coli RNA polymerase alpha subunit amino-terminal domain. Science 1998;281:262-266.
7613089 The Escherichia coli RNA polymerase alpha subunit: structure and function. Curr Opin Genet Dev 1995;5:197-203.
9050843 The two alpha subunits of Escherichia coli RNA polymerase are asymmetrically arranged and contact different halves of the DNA upstream element. Proc Natl Acad Sci USA 1997;94:1709-1714.

bHLH-MYC_N

Domain	Description	Evalue	Bits	GA	Start	End
bHLH-MYC_N	bHLH-MYC and R2R3-MYB transcription factors N-terminal	0	169	30.20	23	216
RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain	5.9E-05	11	21.30	196	254
bHLH-MYC_N	bHLH-MYC and R2R3-MYB transcription factors N-terminal	0.23	-1	30.20	285	346
HLH	Helix-loop-helix DNA-binding domain	8.8E-08	20	20.70	346	383
RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain	0.58	-2	21.30	449	449
RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain	0.22	0	21.30	459	507