AT4G02195.1 :

DomainDescriptionEvalueBitsGAStartEnd
SyntaxinSyntaxin3.8E-082325.0078262
Syntaxin_2Syntaxin-like protein0.03430.5078104
MCPsignalMethyl-accepting chemotaxis protein (MCP) signaling domain0.27030.0081102
PromininProminin0.021231.0085183
Syntaxin_2Syntaxin-like protein7.9E-071930.5086180
DUF948Bacterial protein of unknown function (DUF948)0.0078628.10113137
Peptidase_S64Peptidase family S647.1E-051119.80141316
MCPsignalMethyl-accepting chemotaxis protein (MCP) signaling domain0.000131130.00219276
POTRA_2POTRA domain, ShlB-type0.000191120.70221277
DUF948Bacterial protein of unknown function (DUF948)0.000331028.10234280
Syntaxin_2Syntaxin-like protein0.0049730.50235289
PromininProminin3E-051131.00237316
SNARESNARE domain6.5E-206030.00263315
DUF2417Region of unknown function (DUF2417)1.7E-051425.00268322

 323

Syntaxin
Syntaxin_2
MCPsignal
Prominin
Syntaxin_2
DUF948
Peptidase_S64
MCPsignal
POTRA_2
DUF948
Syntaxin_2
Prominin
SNARE
DUF2417


References:

Prominin
11467842 Rat prominin, like its mouse and human orthologues, is a pentaspan membrane glycoprotein. Biochem Biophys Res Commun 2001;285:939-944.
10587575 A frameshift mutation in prominin (mouse)-like 1 causes human retinal degeneration. Hum Mol Genet 2000;9:27-34.

Syntaxin
11839791 Characterization of temperature-sensitive mutations in the yeast syntaxin 1 homologues Sso1p and Sso2p, and evidence of a distinct function for Sso1p in sporulation. J Cell Sci 2002;115:409-420.
11157748 t-SNARE dephosphorylation promotes SNARE assembly and exocytosis in yeast. EMBO J 2001;20:411-421.
11224573 Vam3p structure reveals conserved and divergent properties of syntaxins. Nat Struct Biol 2001;8:258-264.
11224554 The taming of the SNARE. Nat Struct Biol 2001;8:186-188.
12072456 Gene overexpression as a tool for identifying new trans-acting factors involved in translation termination in Saccharomyces cerevisiae. Genetics 2002;161:585-594.
11737951 The syntaxins. Genome Biol 2001;2:REVIEWS3012.

Syntaxin_2

SNARE
9096343 A conserved domain is present in different families of vesicular fusion proteins: a new superfamily. Proc Natl Acad Sci U S A 1997;94:3046-3051.

DUF2417

POTRA_2
14559180 POTRA: a conserved domain in the FtsQ family and a class of beta-barrel outer membrane proteins. Trends Biochem Sci 2003;28:523-526.

MCPsignal
1601874 Sequence and characterization of Bacillus subtilis CheW. J Biol Chem 1992;267:12055-12060.

DUF948

Peptidase_S64
15509782 Amino acid signaling in yeast: casein kinase I and the Ssy5 endoprotease are key determinants of endoproteolytic activation of the membrane-bound Stp1 transcription factor. Mol Cell Biol 2004;24:9771-9785.