c2pfam

AT4G02780.1 :

Domain Description Evalue Bits GA Start End
Alba Alba 2.4E-05 13 20.90 85 121
SQHop_cyclase_C Squalene-hopene cyclase C-terminal domain 6.4E-06 14 26.10 126 165
Prenyltrans Prenyltransferase and squalene oxidase repeat 0.00036 9 21.20 137 154
Terpene_synth Terpene synthase, N-terminal domain 0 187 20.20 272 478
Prenyltrans Prenyltransferase and squalene oxidase repeat 0.16 0 21.20 276 286
SQHop_cyclase_C Squalene-hopene cyclase C-terminal domain 0.83 -3 26.10 374 386
Terpene_synth_C Terpene synthase family, metal binding domain 2E-22 68 23.20 522 597
Terpene_synth_C Terpene synthase family, metal binding domain 0.15 0 23.20 699 758

802

Alba
SQHop_cyclase_C
Prenyltrans
Terpene_synth
Prenyltrans
SQHop_cyclase_C
Terpene_synth_C
Terpene_synth_C

References:

Prenyltrans
9295270 Structure and function of a squalene cyclase. Science 1997;277:1811-1815.
8016864 A specific amino acid repeat in squalene and oxidosqualene cyclases. Trends Biochem Sci 1994;19:157-158.

Terpene_synth_C
9268308 Monoterpene synthases from grand fir (Abies grandis). cDNA isolation, characterization, and functional expression of myrcene synthase, (-)-(4S)-limonene synthase, and (-)-(1S,5S)-pinene synthase. J Biol Chem 1997;272:21784-21792.

Terpene_synth
9268308 Monoterpene synthases from grand fir (Abies grandis). cDNA isolation, characterization, and functional expression of myrcene synthase, (-)-(4S)-limonene synthase, and (-)-(1S,5S)-pinene synthase. J Biol Chem 1997;272:21784-21792.

Alba
14519199 The two faces of Alba: the evolutionary connection between proteins participating in chromatin structure and RNA metabolism. Genome Biol 2003;4:R64.
11935028 The interaction of Alba, a conserved archaeal chromatin protein, with Sir2 and its regulation by acetylation. Science 2002;296:148-151.
10869069 An abundant DNA binding protein from the hyperthermophilic archaeon Sulfolobus shibatae affects DNA supercoiling in a temperature-dependent fashion. J Bacteriol 2000;182:3929-3933.
10320587 Identification of the gene encoding archeal-specific DNA-binding proteins of the Sac10b family. Mol Microbiol 1999;32:669-670.

SQHop_cyclase_C

Domain	Description	Evalue	Bits	GA	Start	End
Alba	Alba	2.4E-05	13	20.90	85	121
SQHop_cyclase_C	Squalene-hopene cyclase C-terminal domain	6.4E-06	14	26.10	126	165
Prenyltrans	Prenyltransferase and squalene oxidase repeat	0.00036	9	21.20	137	154
Terpene_synth	Terpene synthase, N-terminal domain	0	187	20.20	272	478
Prenyltrans	Prenyltransferase and squalene oxidase repeat	0.16	0	21.20	276	286
SQHop_cyclase_C	Squalene-hopene cyclase C-terminal domain	0.83	-3	26.10	374	386
Terpene_synth_C	Terpene synthase family, metal binding domain	2E-22	68	23.20	522	597
Terpene_synth_C	Terpene synthase family, metal binding domain	0.15	0	23.20	699	758