c2pfam

AT4G03110.1 :

Domain Description Evalue Bits GA Start End
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.037 2 27.00 12 54
BRAP2 BRCA1-associated protein 2 0.00019 10 20.30 13 82
RRM_7 RNA recognition motif 1.7E-06 17 27.00 17 84
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.6E-14 42 20.70 20 85
RNA_bind RNA binding domain 0.84 -1 23.60 24 44
RNA_bind RNA binding domain 0.00035 9 23.60 105 169
RRM_7 RNA recognition motif 3.7E-06 16 27.00 106 133
BRAP2 BRCA1-associated protein 2 9.7E-05 11 20.30 107 170
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.3E-19 59 20.70 108 175
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.0011 7 27.00 111 179
Golgin_A5 Golgin subfamily A member 5 2.6E-05 12 30.00 135 205
BRAP2 BRCA1-associated protein 2 0.46 0 20.30 350 413
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.8E-21 65 20.70 351 421
RRM_7 RNA recognition motif 0.017 4 27.00 351 376
RNA_bind RNA binding domain 0.19 1 23.60 353 376
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.0013 7 27.00 395 428

441

RRM_5
BRAP2
RRM_7
RRM_1
RNA_bind
RNA_bind
RRM_7
BRAP2
RRM_1
RRM_5
Golgin_A5
BRAP2
RRM_1
RRM_7
RNA_bind
RRM_5

References:

RRM_7

RRM_5

Golgin_A5
12656988 Golgin-84 is a rab1 binding partner involved in Golgi structure. Traffic. 2003;4:153-161.

RRM_1
8290338 Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucleic Acid Res 1993;21:5803-5816.

BRAP2
9497340 Identification of a novel cytoplasmic protein that specifically binds to nuclear localization signal motifs. J Biol Chem 1998;273:6183-6189.

RNA_bind

Domain	Description	Evalue	Bits	GA	Start	End
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.037	2	27.00	12	54
BRAP2	BRCA1-associated protein 2	0.00019	10	20.30	13	82
RRM_7	RNA recognition motif	1.7E-06	17	27.00	17	84
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	2.6E-14	42	20.70	20	85
RNA_bind	RNA binding domain	0.84	-1	23.60	24	44
RNA_bind	RNA binding domain	0.00035	9	23.60	105	169
RRM_7	RNA recognition motif	3.7E-06	16	27.00	106	133
BRAP2	BRCA1-associated protein 2	9.7E-05	11	20.30	107	170
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	1.3E-19	59	20.70	108	175
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.0011	7	27.00	111	179
Golgin_A5	Golgin subfamily A member 5	2.6E-05	12	30.00	135	205
BRAP2	BRCA1-associated protein 2	0.46	0	20.30	350	413
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	1.8E-21	65	20.70	351	421
RRM_7	RNA recognition motif	0.017	4	27.00	351	376
RNA_bind	RNA binding domain	0.19	1	23.60	353	376
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.0013	7	27.00	395	428