c2pfam

AT4G03290.1 :

Domain Description Evalue Bits GA Start End
EF-hand_4 Cytoskeletal-regulatory complex EF hand 2.3E-06 18 21.30 3 67
Caleosin Caleosin related protein 2.7E-05 15 20.60 3 36
EF-hand_7 EF-hand domain pair 3.5E-17 53 30.00 5 67
EF-hand_1 EF hand 1.6E-10 30 25.40 5 32
EF-hand_6 EF-hand domain 6.1E-10 29 25.00 5 31
EF-hand_8 EF-hand domain pair 0.00029 11 28.00 5 25
Toprim_4 Toprim domain 0.0025 9 21.80 5 32
EF-hand_5 EF hand 1.5E-10 31 25.90 6 28
Toprim_2 Toprim-like 0.0023 9 22.10 7 42
EF-hand_9 EF-hand domain 0.00025 12 37.00 7 63
EF-hand_14 EF-hand domain 0.00075 10 23.70 8 50
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 4.4E-05 14 21.40 9 64
Dockerin_1 Dockerin type I repeat 0.06 4 20.50 11 23
VCBS Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 0.0071 7 26.90 16 59
EF-hand_8 EF-hand domain pair 4.2E-09 27 28.00 18 64
Hyphal_reg_CWP Hyphally regulated cell wall protein N-terminal 8.8E-05 12 25.00 19 67
EF-hand_1 EF hand 2.6E-09 27 25.40 41 68
EF-hand_6 EF-hand domain 2.5E-06 18 25.00 45 68
EF-hand_5 EF hand 1.4E-07 21 25.90 46 65
Dockerin_1 Dockerin type I repeat 0.0043 8 20.50 47 58
Dockerin_1 Dockerin type I repeat 0.0001 13 20.50 50 98
DUF853 Bacterial protein of unknown function (DUF853) 0.023 4 19.80 59 112
EF-hand_8 EF-hand domain pair 0.00022 11 28.00 66 97
Toprim_2 Toprim-like 0.4 2 22.10 67 92
Toprim_4 Toprim domain 0.25 2 21.80 72 104
EF-hand_7 EF-hand domain pair 4.5E-17 53 30.00 79 145
EF-hand_4 Cytoskeletal-regulatory complex EF hand 4.5E-05 14 21.30 80 145
EF-hand_6 EF-hand domain 2.8E-12 36 25.00 81 110
EF-hand_1 EF hand 7E-12 35 25.40 81 108
EF-hand_5 EF hand 1.1E-10 31 25.90 83 105
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 4.8E-05 14 21.40 83 141
EF-hand_9 EF-hand domain 1.3E-05 16 37.00 85 145
Caleosin Caleosin related protein 0.0062 7 20.60 85 111
EF-hand_14 EF-hand domain 0.013 6 23.70 86 114
EF-hand_8 EF-hand domain pair 3.9E-14 43 28.00 94 146
SAP SAP domain 4.6E-05 14 22.60 98 113
Telomere_Sde2_2 Telomere stability C-terminal 6.1E-06 16 23.60 99 121
Toprim_2 Toprim-like 0.0049 8 22.10 104 146
VCBS Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 0.08 4 26.90 116 134
Toprim_4 Toprim domain 0.38 2 21.80 116 139
DUF3117 Protein of unknown function (DUF3117) 0.0005 10 25.00 117 135
EF-hand_1 EF hand 3.7E-11 32 25.40 119 146
EF-hand_5 EF hand 2.3E-07 21 25.90 123 144
DUF853 Bacterial protein of unknown function (DUF853) 0.0091 5 19.80 124 152
EF-hand_6 EF-hand domain 4.1E-06 17 25.00 125 146
Dockerin_1 Dockerin type I repeat 0.00035 11 20.50 126 145

154

EF-hand_4
Caleosin
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
Toprim_4
EF-hand_5
Toprim_2
EF-hand_9
EF-hand_14
SPARC_Ca_bdg
Dockerin_1
VCBS
EF-hand_8
Hyphal_reg_CWP
EF-hand_1
EF-hand_6
EF-hand_5
Dockerin_1
Dockerin_1
DUF853
EF-hand_8
Toprim_2
Toprim_4
EF-hand_7
EF-hand_4
EF-hand_6
EF-hand_1
EF-hand_5
SPARC_Ca_bdg
EF-hand_9
Caleosin
EF-hand_14
EF-hand_8
SAP
Telomere_Sde2_2
Toprim_2
VCBS
Toprim_4
DUF3117
EF-hand_1
EF-hand_5
DUF853
EF-hand_6
Dockerin_1

References:

Telomere_Sde2_2

DUF853

EF-hand_9

EF-hand_8

EF-hand_7

EF-hand_6

EF-hand_5

EF-hand_4

EF-hand_14

EF-hand_1

Hyphal_reg_CWP

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

Caleosin
11171180 New insights into the mechanisms of lipid-body biogenesis in plants and other organisms. Biochem Soc Trans 2000;28:710-711.

Toprim_4

DUF3117

Toprim_2

VCBS

SAP
10694879 SAP - a putative DNA-binding motif involved in chromosomal organization. Trends Biochem Sci 2000;25:112-114.
16797182 Conserved ribonuclease, Eri1, negatively regulates heterochromatin assembly in fission yeast. Curr Biol. 2006;16:1459-1464.

Dockerin_1
10390637 The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides [In Process Citation] Trends Microbiol 1999;7:275-281.
10898940 Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Arch Biochem Biophys 2000;379:237-244.

Domain	Description	Evalue	Bits	GA	Start	End
EF-hand_4	Cytoskeletal-regulatory complex EF hand	2.3E-06	18	21.30	3	67
Caleosin	Caleosin related protein	2.7E-05	15	20.60	3	36
EF-hand_7	EF-hand domain pair	3.5E-17	53	30.00	5	67
EF-hand_1	EF hand	1.6E-10	30	25.40	5	32
EF-hand_6	EF-hand domain	6.1E-10	29	25.00	5	31
EF-hand_8	EF-hand domain pair	0.00029	11	28.00	5	25
Toprim_4	Toprim domain	0.0025	9	21.80	5	32
EF-hand_5	EF hand	1.5E-10	31	25.90	6	28
Toprim_2	Toprim-like	0.0023	9	22.10	7	42
EF-hand_9	EF-hand domain	0.00025	12	37.00	7	63
EF-hand_14	EF-hand domain	0.00075	10	23.70	8	50
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	4.4E-05	14	21.40	9	64
Dockerin_1	Dockerin type I repeat	0.06	4	20.50	11	23
VCBS	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	0.0071	7	26.90	16	59
EF-hand_8	EF-hand domain pair	4.2E-09	27	28.00	18	64
Hyphal_reg_CWP	Hyphally regulated cell wall protein N-terminal	8.8E-05	12	25.00	19	67
EF-hand_1	EF hand	2.6E-09	27	25.40	41	68
EF-hand_6	EF-hand domain	2.5E-06	18	25.00	45	68
EF-hand_5	EF hand	1.4E-07	21	25.90	46	65
Dockerin_1	Dockerin type I repeat	0.0043	8	20.50	47	58
Dockerin_1	Dockerin type I repeat	0.0001	13	20.50	50	98
DUF853	Bacterial protein of unknown function (DUF853)	0.023	4	19.80	59	112
EF-hand_8	EF-hand domain pair	0.00022	11	28.00	66	97
Toprim_2	Toprim-like	0.4	2	22.10	67	92
Toprim_4	Toprim domain	0.25	2	21.80	72	104
EF-hand_7	EF-hand domain pair	4.5E-17	53	30.00	79	145
EF-hand_4	Cytoskeletal-regulatory complex EF hand	4.5E-05	14	21.30	80	145
EF-hand_6	EF-hand domain	2.8E-12	36	25.00	81	110
EF-hand_1	EF hand	7E-12	35	25.40	81	108
EF-hand_5	EF hand	1.1E-10	31	25.90	83	105
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	4.8E-05	14	21.40	83	141
EF-hand_9	EF-hand domain	1.3E-05	16	37.00	85	145
Caleosin	Caleosin related protein	0.0062	7	20.60	85	111
EF-hand_14	EF-hand domain	0.013	6	23.70	86	114
EF-hand_8	EF-hand domain pair	3.9E-14	43	28.00	94	146
SAP	SAP domain	4.6E-05	14	22.60	98	113
Telomere_Sde2_2	Telomere stability C-terminal	6.1E-06	16	23.60	99	121
Toprim_2	Toprim-like	0.0049	8	22.10	104	146
VCBS	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	0.08	4	26.90	116	134
Toprim_4	Toprim domain	0.38	2	21.80	116	139
DUF3117	Protein of unknown function (DUF3117)	0.0005	10	25.00	117	135
EF-hand_1	EF hand	3.7E-11	32	25.40	119	146
EF-hand_5	EF hand	2.3E-07	21	25.90	123	144
DUF853	Bacterial protein of unknown function (DUF853)	0.0091	5	19.80	124	152
EF-hand_6	EF-hand domain	4.1E-06	17	25.00	125	146
Dockerin_1	Dockerin type I repeat	0.00035	11	20.50	126	145