c2pfam

AT4G03430.1 :

Domain Description Evalue Bits GA Start End
PRP1_N PRP1 splicing factor, N-terminal 0 189 20.90 102 266
TPR_19 Tetratricopeptide repeat 0.0098 6 25.00 370 419
HAT HAT (Half-A-TPR) repeat 0.78 0 21.00 370 398
TPR_16 Tetratricopeptide repeat 0.23 2 32.70 371 410
TPR_9 Tetratricopeptide repeat 0.0044 7 35.00 371 423
TPR_17 Tetratricopeptide repeat 0.14 3 24.40 377 407
TPR_14 Tetratricopeptide repeat 2.7E-05 15 23.50 387 430
TPR_2 Tetratricopeptide repeat 0.41 1 22.40 389 420
TPR_14 Tetratricopeptide repeat 0.041 5 23.50 429 460
TPR_14 Tetratricopeptide repeat 0.48 2 23.50 469 488
TPR_14 Tetratricopeptide repeat 0.00046 11 23.50 490 521
TPR_17 Tetratricopeptide repeat 0.014 6 24.40 503 522
TPR_2 Tetratricopeptide repeat 0.52 1 22.40 517 540
TPR_16 Tetratricopeptide repeat 0.54 1 32.70 518 561
TPR_14 Tetratricopeptide repeat 0.0024 9 23.50 519 551
TPR_19 Tetratricopeptide repeat 0.0011 9 25.00 523 561
DUF3808 Protein of unknown function (DUF3808) 0.0056 5 22.20 525 565
TPR_14 Tetratricopeptide repeat 0.31 2 23.50 542 561
TPR_2 Tetratricopeptide repeat 0.96 0 22.40 543 561
TPR_8 Tetratricopeptide repeat 0.93 0 25.70 632 653
TPR_14 Tetratricopeptide repeat 0.13 3 23.50 635 668
HAT HAT (Half-A-TPR) repeat 0.13 2 21.00 641 669
FAT FAT domain 0.38 -1 20.00 649 695
TPR_14 Tetratricopeptide repeat 0.13 3 23.50 662 700
DUF3808 Protein of unknown function (DUF3808) 0.18 0 22.20 671 721
TPR_14 Tetratricopeptide repeat 0.0002 12 23.50 695 735
TPR_19 Tetratricopeptide repeat 7E-08 23 25.00 706 764
TPR_16 Tetratricopeptide repeat 0.077 4 32.70 706 726
TPR_14 Tetratricopeptide repeat 0.0017 9 23.50 728 762
TPR_16 Tetratricopeptide repeat 0.00083 10 32.70 731 791
FAT FAT domain 0.00098 8 20.00 749 896
TPR_14 Tetratricopeptide repeat 7.5E-08 23 23.50 762 803
DUF3808 Protein of unknown function (DUF3808) 0.092 1 22.20 772 821
TPR_16 Tetratricopeptide repeat 0.0069 7 32.70 781 825
TPR_19 Tetratricopeptide repeat 0.024 5 25.00 782 823
TPR_17 Tetratricopeptide repeat 0.0013 9 24.40 784 815
TPR_2 Tetratricopeptide repeat 7.1E-05 13 22.40 795 826
TPR_1 Tetratricopeptide repeat 0.0028 7 20.40 795 827
TPR_8 Tetratricopeptide repeat 0.0042 7 25.70 795 822
TPR_14 Tetratricopeptide repeat 3.3E-08 24 23.50 795 837
TPR_9 Tetratricopeptide repeat 0.017 5 35.00 796 826
TPR_19 Tetratricopeptide repeat 2.1E-05 15 25.00 810 865
TPR_17 Tetratricopeptide repeat 0.41 1 24.40 817 848
TPR_16 Tetratricopeptide repeat 0.00037 11 32.70 833 893
DUF3808 Protein of unknown function (DUF3808) 0.087 1 22.20 842 889
TPR_19 Tetratricopeptide repeat 0.00013 12 25.00 845 891
TPR_14 Tetratricopeptide repeat 0.00067 10 23.50 863 899
TPR_2 Tetratricopeptide repeat 0.047 4 22.40 873 894
FAT FAT domain 0.012 4 20.00 923 946
TPR_14 Tetratricopeptide repeat 0.00032 11 23.50 930 963
TPR_16 Tetratricopeptide repeat 0.007 7 32.70 932 958
TPR_8 Tetratricopeptide repeat 0.013 6 25.70 933 954
TPR_2 Tetratricopeptide repeat 0.0045 7 22.40 933 957
TPR_1 Tetratricopeptide repeat 0.055 3 20.40 936 958
HAT HAT (Half-A-TPR) repeat 0.009 6 21.00 940 970

1029

PRP1_N
TPR_19
HAT
TPR_16
TPR_9
TPR_17
TPR_14
TPR_2
TPR_14
TPR_14
TPR_14
TPR_17
TPR_2
TPR_16
TPR_14
TPR_19
DUF3808
TPR_14
TPR_2
TPR_8
TPR_14
HAT
FAT
TPR_14
DUF3808
TPR_14
TPR_19
TPR_16
TPR_14
TPR_16
FAT
TPR_14
DUF3808
TPR_16
TPR_19
TPR_17
TPR_2
TPR_1
TPR_8
TPR_14
TPR_9
TPR_19
TPR_17
TPR_16
DUF3808
TPR_19
TPR_14
TPR_2
FAT
TPR_14
TPR_16
TPR_8
TPR_2
TPR_1
HAT

References:

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_19

TPR_17

TPR_16

PRP1_N
9003295 Isolation of novel pre-mRNA splicing mutants of Schizosaccharomyces pombe. Mol Gen Genet 1996;253:118-127.

TPR_14

HAT
9478129 The HAT helix, a repetitive motif implicated in RNA processing. Trends Biochem Sci 1998;23:15-16.

DUF3808

FAT
10782091 FAT: a novel domain in PIK-related kinases. Trends Biochem Sci 2000;25:225-227.

TPR_9

TPR_8

Domain	Description	Evalue	Bits	GA	Start	End
PRP1_N	PRP1 splicing factor, N-terminal	0	189	20.90	102	266
TPR_19	Tetratricopeptide repeat	0.0098	6	25.00	370	419
HAT	HAT (Half-A-TPR) repeat	0.78	0	21.00	370	398
TPR_16	Tetratricopeptide repeat	0.23	2	32.70	371	410
TPR_9	Tetratricopeptide repeat	0.0044	7	35.00	371	423
TPR_17	Tetratricopeptide repeat	0.14	3	24.40	377	407
TPR_14	Tetratricopeptide repeat	2.7E-05	15	23.50	387	430
TPR_2	Tetratricopeptide repeat	0.41	1	22.40	389	420
TPR_14	Tetratricopeptide repeat	0.041	5	23.50	429	460
TPR_14	Tetratricopeptide repeat	0.48	2	23.50	469	488
TPR_14	Tetratricopeptide repeat	0.00046	11	23.50	490	521
TPR_17	Tetratricopeptide repeat	0.014	6	24.40	503	522
TPR_2	Tetratricopeptide repeat	0.52	1	22.40	517	540
TPR_16	Tetratricopeptide repeat	0.54	1	32.70	518	561
TPR_14	Tetratricopeptide repeat	0.0024	9	23.50	519	551
TPR_19	Tetratricopeptide repeat	0.0011	9	25.00	523	561
DUF3808	Protein of unknown function (DUF3808)	0.0056	5	22.20	525	565
TPR_14	Tetratricopeptide repeat	0.31	2	23.50	542	561
TPR_2	Tetratricopeptide repeat	0.96	0	22.40	543	561
TPR_8	Tetratricopeptide repeat	0.93	0	25.70	632	653
TPR_14	Tetratricopeptide repeat	0.13	3	23.50	635	668
HAT	HAT (Half-A-TPR) repeat	0.13	2	21.00	641	669
FAT	FAT domain	0.38	-1	20.00	649	695
TPR_14	Tetratricopeptide repeat	0.13	3	23.50	662	700
DUF3808	Protein of unknown function (DUF3808)	0.18	0	22.20	671	721
TPR_14	Tetratricopeptide repeat	0.0002	12	23.50	695	735
TPR_19	Tetratricopeptide repeat	7E-08	23	25.00	706	764
TPR_16	Tetratricopeptide repeat	0.077	4	32.70	706	726
TPR_14	Tetratricopeptide repeat	0.0017	9	23.50	728	762
TPR_16	Tetratricopeptide repeat	0.00083	10	32.70	731	791
FAT	FAT domain	0.00098	8	20.00	749	896
TPR_14	Tetratricopeptide repeat	7.5E-08	23	23.50	762	803
DUF3808	Protein of unknown function (DUF3808)	0.092	1	22.20	772	821
TPR_16	Tetratricopeptide repeat	0.0069	7	32.70	781	825
TPR_19	Tetratricopeptide repeat	0.024	5	25.00	782	823
TPR_17	Tetratricopeptide repeat	0.0013	9	24.40	784	815
TPR_2	Tetratricopeptide repeat	7.1E-05	13	22.40	795	826
TPR_1	Tetratricopeptide repeat	0.0028	7	20.40	795	827
TPR_8	Tetratricopeptide repeat	0.0042	7	25.70	795	822
TPR_14	Tetratricopeptide repeat	3.3E-08	24	23.50	795	837
TPR_9	Tetratricopeptide repeat	0.017	5	35.00	796	826
TPR_19	Tetratricopeptide repeat	2.1E-05	15	25.00	810	865
TPR_17	Tetratricopeptide repeat	0.41	1	24.40	817	848
TPR_16	Tetratricopeptide repeat	0.00037	11	32.70	833	893
DUF3808	Protein of unknown function (DUF3808)	0.087	1	22.20	842	889
TPR_19	Tetratricopeptide repeat	0.00013	12	25.00	845	891
TPR_14	Tetratricopeptide repeat	0.00067	10	23.50	863	899
TPR_2	Tetratricopeptide repeat	0.047	4	22.40	873	894
FAT	FAT domain	0.012	4	20.00	923	946
TPR_14	Tetratricopeptide repeat	0.00032	11	23.50	930	963
TPR_16	Tetratricopeptide repeat	0.007	7	32.70	932	958
TPR_8	Tetratricopeptide repeat	0.013	6	25.70	933	954
TPR_2	Tetratricopeptide repeat	0.0045	7	22.40	933	957
TPR_1	Tetratricopeptide repeat	0.055	3	20.40	936	958
HAT	HAT (Half-A-TPR) repeat	0.009	6	21.00	940	970