c2pfam

AT1G18260.1 :

Domain Description Evalue Bits GA Start End
TPR_19 Tetratricopeptide repeat 0.011 6 25.00 156 191
TPR_16 Tetratricopeptide repeat 0.032 5 32.70 159 188
TPR_14 Tetratricopeptide repeat 0.001 10 23.50 164 191
TPR_3 Tetratricopeptide repeat 0.27 1 20.70 164 184
TPR_12 Tetratricopeptide repeat 0.0016 8 30.10 165 190
TPR_2 Tetratricopeptide repeat 0.0025 8 22.40 165 188
TPR_7 Tetratricopeptide repeat 0.01 6 27.90 166 189
TPR_1 Tetratricopeptide repeat 0.013 5 20.40 166 183
TPR_6 Tetratricopeptide repeat 0.0064 7 26.30 166 189
TPR_11 TPR repeat 0.56 0 26.80 241 253
Sel1 Sel1 repeat 1.5E-11 34 21.10 243 277
TPR_6 Tetratricopeptide repeat 0.1 3 26.30 244 266
TPR_2 Tetratricopeptide repeat 0.35 1 22.40 261 274
TPR_1 Tetratricopeptide repeat 0.81 -1 20.40 261 274
TPR_16 Tetratricopeptide repeat 0.0026 8 32.70 264 311
Sel1 Sel1 repeat 7.9E-10 29 21.10 280 313
TPR_7 Tetratricopeptide repeat 0.069 3 27.90 284 310
TPR_2 Tetratricopeptide repeat 0.78 0 22.40 297 310
Sel1 Sel1 repeat 1.6E-07 22 21.10 321 349
TPR_6 Tetratricopeptide repeat 0.0017 9 26.30 321 349
TPR_16 Tetratricopeptide repeat 0.0004 11 32.70 332 363
TPR_11 TPR repeat 1.6E-05 14 26.80 332 364
TPR_3 Tetratricopeptide repeat 0.002 8 20.70 332 343
TPR_2 Tetratricopeptide repeat 0.00032 11 22.40 333 347
TPR_1 Tetratricopeptide repeat 0.00095 9 20.40 333 347
TPR_19 Tetratricopeptide repeat 0.015 6 25.00 333 364
TPR_14 Tetratricopeptide repeat 0.083 4 23.50 334 352
TPR_12 Tetratricopeptide repeat 0.0074 6 30.10 334 348
TPR_7 Tetratricopeptide repeat 0.018 5 27.90 335 351
Sel1 Sel1 repeat 3.7E-07 20 21.10 352 386
TPR_2 Tetratricopeptide repeat 0.31 1 22.40 354 364
TPR_1 Tetratricopeptide repeat 0.027 4 20.40 354 364
Sel1 Sel1 repeat 0.0034 8 21.10 392 422
TPR_2 Tetratricopeptide repeat 0.054 4 22.40 427 450
TPR_3 Tetratricopeptide repeat 0.026 4 20.70 427 448
Sel1 Sel1 repeat 0.0083 7 21.10 437 455
Sel1 Sel1 repeat 0.0015 9 21.10 505 528
TPR_6 Tetratricopeptide repeat 0.53 1 26.30 506 531
TPR_16 Tetratricopeptide repeat 0.032 5 32.70 523 552
TPR_11 TPR repeat 0.28 1 26.80 536 549
TPR_12 Tetratricopeptide repeat 0.82 0 30.10 537 554
Sel1 Sel1 repeat 5.4E-07 20 21.10 540 567
TPR_6 Tetratricopeptide repeat 0.25 2 26.30 541 567

678

TPR_19
TPR_16
TPR_14
TPR_3
TPR_12
TPR_2
TPR_7
TPR_1
TPR_6
TPR_11
Sel1
TPR_6
TPR_2
TPR_1
TPR_16
Sel1
TPR_7
TPR_2
Sel1
TPR_6
TPR_16
TPR_11
TPR_3
TPR_2
TPR_1
TPR_19
TPR_14
TPR_12
TPR_7
Sel1
TPR_2
TPR_1
Sel1
TPR_2
TPR_3
Sel1
Sel1
TPR_6
TPR_16
TPR_11
TPR_12
Sel1
TPR_6

References:

TPR_7

TPR_6

TPR_19

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_16

TPR_3
12799000 Tetratricopeptide-like repeats in type-III-secretion chaperones and regulators. FEMS Microbiol Lett 2003;223:53-60.

TPR_14

TPR_12

TPR_11

Sel1
8722778 The Caenorhabditis elegans sel-1 gene, a negative regulator of lin-12 and glp-1, encodes a predicted extracellular protein. Genetics 1996;143:237-247.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

Domain	Description	Evalue	Bits	GA	Start	End
TPR_19	Tetratricopeptide repeat	0.011	6	25.00	156	191
TPR_16	Tetratricopeptide repeat	0.032	5	32.70	159	188
TPR_14	Tetratricopeptide repeat	0.001	10	23.50	164	191
TPR_3	Tetratricopeptide repeat	0.27	1	20.70	164	184
TPR_12	Tetratricopeptide repeat	0.0016	8	30.10	165	190
TPR_2	Tetratricopeptide repeat	0.0025	8	22.40	165	188
TPR_7	Tetratricopeptide repeat	0.01	6	27.90	166	189
TPR_1	Tetratricopeptide repeat	0.013	5	20.40	166	183
TPR_6	Tetratricopeptide repeat	0.0064	7	26.30	166	189
TPR_11	TPR repeat	0.56	0	26.80	241	253
Sel1	Sel1 repeat	1.5E-11	34	21.10	243	277
TPR_6	Tetratricopeptide repeat	0.1	3	26.30	244	266
TPR_2	Tetratricopeptide repeat	0.35	1	22.40	261	274
TPR_1	Tetratricopeptide repeat	0.81	-1	20.40	261	274
TPR_16	Tetratricopeptide repeat	0.0026	8	32.70	264	311
Sel1	Sel1 repeat	7.9E-10	29	21.10	280	313
TPR_7	Tetratricopeptide repeat	0.069	3	27.90	284	310
TPR_2	Tetratricopeptide repeat	0.78	0	22.40	297	310
Sel1	Sel1 repeat	1.6E-07	22	21.10	321	349
TPR_6	Tetratricopeptide repeat	0.0017	9	26.30	321	349
TPR_16	Tetratricopeptide repeat	0.0004	11	32.70	332	363
TPR_11	TPR repeat	1.6E-05	14	26.80	332	364
TPR_3	Tetratricopeptide repeat	0.002	8	20.70	332	343
TPR_2	Tetratricopeptide repeat	0.00032	11	22.40	333	347
TPR_1	Tetratricopeptide repeat	0.00095	9	20.40	333	347
TPR_19	Tetratricopeptide repeat	0.015	6	25.00	333	364
TPR_14	Tetratricopeptide repeat	0.083	4	23.50	334	352
TPR_12	Tetratricopeptide repeat	0.0074	6	30.10	334	348
TPR_7	Tetratricopeptide repeat	0.018	5	27.90	335	351
Sel1	Sel1 repeat	3.7E-07	20	21.10	352	386
TPR_2	Tetratricopeptide repeat	0.31	1	22.40	354	364
TPR_1	Tetratricopeptide repeat	0.027	4	20.40	354	364
Sel1	Sel1 repeat	0.0034	8	21.10	392	422
TPR_2	Tetratricopeptide repeat	0.054	4	22.40	427	450
TPR_3	Tetratricopeptide repeat	0.026	4	20.70	427	448
Sel1	Sel1 repeat	0.0083	7	21.10	437	455
Sel1	Sel1 repeat	0.0015	9	21.10	505	528
TPR_6	Tetratricopeptide repeat	0.53	1	26.30	506	531
TPR_16	Tetratricopeptide repeat	0.032	5	32.70	523	552
TPR_11	TPR repeat	0.28	1	26.80	536	549
TPR_12	Tetratricopeptide repeat	0.82	0	30.10	537	554
Sel1	Sel1 repeat	5.4E-07	20	21.10	540	567
TPR_6	Tetratricopeptide repeat	0.25	2	26.30	541	567