c2pfam

AT4G05020.1 :

Domain Description Evalue Bits GA Start End
PAH Paired amphipathic helix repeat 0.042 4 21.30 6 22
Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 0 221 22.80 59 384
Pyr_redox Pyridine nucleotide-disulphide oxidoreductase 0.014 6 22.00 60 93
NAD_binding_9 FAD-NAD(P)-binding 0.69 0 21.80 63 85
NAD_binding_8 NAD(P)-binding Rossmann-like domain 0.039 4 21.90 64 92
PAH Paired amphipathic helix repeat 0.049 4 21.30 72 89
NAD_binding_9 FAD-NAD(P)-binding 0.34 1 21.80 115 172
DAO FAD dependent oxidoreductase 0.26 1 24.70 156 177
Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 0.011 5 30.00 163 199
Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 5.6E-05 12 30.00 224 331
DAO FAD dependent oxidoreductase 0.0031 7 24.70 224 269
Pyr_redox Pyridine nucleotide-disulphide oxidoreductase 1.5E-14 44 22.00 224 307
NAD_binding_9 FAD-NAD(P)-binding 0.0049 7 21.80 226 267
NAD_binding_8 NAD(P)-binding Rossmann-like domain 0.00042 10 21.90 227 271
DAO FAD dependent oxidoreductase 0.00069 9 24.70 278 340
PAH Paired amphipathic helix repeat 0.12 2 21.30 337 390
p25-alpha p25-alpha 2.5E-05 14 20.90 371 414
EF-hand_7 EF-hand domain pair 2.1E-06 18 30.00 380 408
EF-hand_8 EF-hand domain pair 9.8E-06 15 28.00 382 408
EF-hand_1 EF hand 3.6E-09 26 25.40 384 409
EF-hand_6 EF-hand domain 4E-07 20 25.00 386 409
EF-hand_5 EF hand 1.5E-06 18 25.90 387 406
EF-hand_6 EF-hand domain 0.41 1 25.00 441 460

582

PAH
Pyr_redox_2
Pyr_redox
NAD_binding_9
NAD_binding_8
PAH
NAD_binding_9
DAO
Pyr_redox_3
Pyr_redox_3
DAO
Pyr_redox
NAD_binding_9
NAD_binding_8
DAO
PAH
p25-alpha
EF-hand_7
EF-hand_8
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_6

References:

EF-hand_8

EF-hand_7

EF-hand_6

EF-hand_5

PAH
2233725 The Saccharomyces cerevisiae SIN3 gene, a negative regulator of HO, contains four paired amphipathic helix motifs. Mol Cell Biol 1990;10:5927-5936.

Pyr_redox_2
8805537 Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase. Structure 1996;4:277-286.

EF-hand_1

DAO
9153426 Active site plasticity in D-amino acid oxidase: a crystallographic analysis. Biochemistry 1997;36:5853-5860.

Pyr_redox
8805537 Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase. Structure 1996;4:277-286.

Pyr_redox_3

p25-alpha
1909972 A novel brain-specific 25 kDa protein (p25) is phosphorylated by a Ser/Thr-Pro kinase (TPK II) from tau protein kinase fractions. FEBS Lett 1991;289:37-43.

NAD_binding_9

NAD_binding_8

Domain	Description	Evalue	Bits	GA	Start	End
PAH	Paired amphipathic helix repeat	0.042	4	21.30	6	22
Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	0	221	22.80	59	384
Pyr_redox	Pyridine nucleotide-disulphide oxidoreductase	0.014	6	22.00	60	93
NAD_binding_9	FAD-NAD(P)-binding	0.69	0	21.80	63	85
NAD_binding_8	NAD(P)-binding Rossmann-like domain	0.039	4	21.90	64	92
PAH	Paired amphipathic helix repeat	0.049	4	21.30	72	89
NAD_binding_9	FAD-NAD(P)-binding	0.34	1	21.80	115	172
DAO	FAD dependent oxidoreductase	0.26	1	24.70	156	177
Pyr_redox_3	Pyridine nucleotide-disulphide oxidoreductase	0.011	5	30.00	163	199
Pyr_redox_3	Pyridine nucleotide-disulphide oxidoreductase	5.6E-05	12	30.00	224	331
DAO	FAD dependent oxidoreductase	0.0031	7	24.70	224	269
Pyr_redox	Pyridine nucleotide-disulphide oxidoreductase	1.5E-14	44	22.00	224	307
NAD_binding_9	FAD-NAD(P)-binding	0.0049	7	21.80	226	267
NAD_binding_8	NAD(P)-binding Rossmann-like domain	0.00042	10	21.90	227	271
DAO	FAD dependent oxidoreductase	0.00069	9	24.70	278	340
PAH	Paired amphipathic helix repeat	0.12	2	21.30	337	390
p25-alpha	p25-alpha	2.5E-05	14	20.90	371	414
EF-hand_7	EF-hand domain pair	2.1E-06	18	30.00	380	408
EF-hand_8	EF-hand domain pair	9.8E-06	15	28.00	382	408
EF-hand_1	EF hand	3.6E-09	26	25.40	384	409
EF-hand_6	EF-hand domain	4E-07	20	25.00	386	409
EF-hand_5	EF hand	1.5E-06	18	25.90	387	406
EF-hand_6	EF-hand domain	0.41	1	25.00	441	460