c2pfam

AT4G09460.1 :

Domain Description Evalue Bits GA Start End
SLIDE SLIDE 0.0015 7 20.80 11 40
Myb_DNA-bind_7 Myb DNA-binding like 0.13 1 31.00 12 33
Rap1_C Rap1 - C terminal domain 0.00019 10 21.00 13 33
Myb_DNA-binding Myb-like DNA-binding domain 1.2E-18 56 24.40 14 61
Myb_DNA-bind_2 Rap1 Myb domain 0.0015 8 20.30 16 31
Myb_DNA-bind_6 Myb-like DNA-binding domain 6E-15 44 22.90 17 76
SLIDE SLIDE 0.011 5 20.80 58 87
Myb_DNA-bind_2 Rap1 Myb domain 0.015 4 20.30 67 80
Myb_DNA-binding Myb-like DNA-binding domain 2.1E-18 55 24.40 67 111
Myb_DNA-bind_6 Myb-like DNA-binding domain 1.4E-12 37 22.90 70 116
Myb_DNA-bind_7 Myb DNA-binding like 0.00037 9 31.00 78 111

236

SLIDE
Myb_DNA-bind_7
Rap1_C
Myb_DNA-binding
Myb_DNA-bind_2
Myb_DNA-bind_6
SLIDE
Myb_DNA-bind_2
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7

References:

Myb_DNA-bind_2
11545594 NMR structure of the hRap1 Myb motif reveals a canonical three-helix bundle lacking the positive surface charge typical of Myb DNA-binding domains. J Mol Biol. 2001;312:167-175.

SLIDE
14536084 Crystal structure and functional analysis of a nucleosome recognition module of the remodeling factor ISWI. Mol Cell. 2003;12:449-460.

Myb_DNA-bind_7

Myb_DNA-binding
8882580 The SANT domain: a putative DNA-binding domain in the SWI-SNF and ADA complexes, the transcriptional co-repressor N-CoR and TFIIIB. Trends Biochem Sci 1996;21:87-88.

Myb_DNA-bind_6

Rap1_C
18538788 Structural and functional studies of the Rap1 C-terminus reveal novel separation-of-function mutants. J Mol Biol. 2008;380:520-531.

Domain	Description	Evalue	Bits	GA	Start	End
SLIDE	SLIDE	0.0015	7	20.80	11	40
Myb_DNA-bind_7	Myb DNA-binding like	0.13	1	31.00	12	33
Rap1_C	Rap1 - C terminal domain	0.00019	10	21.00	13	33
Myb_DNA-binding	Myb-like DNA-binding domain	1.2E-18	56	24.40	14	61
Myb_DNA-bind_2	Rap1 Myb domain	0.0015	8	20.30	16	31
Myb_DNA-bind_6	Myb-like DNA-binding domain	6E-15	44	22.90	17	76
SLIDE	SLIDE	0.011	5	20.80	58	87
Myb_DNA-bind_2	Rap1 Myb domain	0.015	4	20.30	67	80
Myb_DNA-binding	Myb-like DNA-binding domain	2.1E-18	55	24.40	67	111
Myb_DNA-bind_6	Myb-like DNA-binding domain	1.4E-12	37	22.90	70	116
Myb_DNA-bind_7	Myb DNA-binding like	0.00037	9	31.00	78	111