c2pfam

AT4G09730.1 :

Domain Description Evalue Bits GA Start End
ResIII Type III restriction enzyme, res subunit 4.1E-10 29 20.90 132 278
DEAD DEAD/DEAH box helicase 0 142 20.60 136 319
Flavi_DEAD Flavivirus DEAD domain 0.00011 11 20.70 148 208
Helicase_C Helicase conserved C-terminal domain 0.37 0 20.90 184 226
Zn_Tnp_IS1 InsA N-terminal domain 1.7E-05 14 26.10 194 219
HAD haloacid dehalogenase-like hydrolase 0.54 0 27.00 213 246
MEDS MEDS: MEthanogen/methylotroph, DcmR Sensory domain 0.002 7 29.80 269 328
HAD haloacid dehalogenase-like hydrolase 0.00021 11 27.00 288 359
DNA_pol3_chi DNA polymerase III chi subunit, HolC 0.00013 11 21.40 344 390
MEDS MEDS: MEthanogen/methylotroph, DcmR Sensory domain 0.023 4 29.80 350 393
Helicase_C Helicase conserved C-terminal domain 9.7E-29 89 20.90 354 466

621

ResIII
DEAD
Flavi_DEAD
Helicase_C
Zn_Tnp_IS1
HAD
MEDS
HAD
DNA_pol3_chi
MEDS
Helicase_C

References:

HAD

Flavi_DEAD

ResIII

DEAD
10322435 Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci 1999;24:192-198.
9862990 The DEAD box RNA helicase family in Arabidopsis thaliana. Nucleic Acids Res 1999;27:628-636.

MEDS

DNA_pol3_chi
7494000 DnaX complex of Escherichia coli DNA polymerase III holoenzyme. The chi psi complex functions by increasing the affinity of tau and gamma for delta.delta' to a physiologically relevant range. J Biol Chem 1995;270:29570-29577.

Helicase_C

Zn_Tnp_IS1

Domain	Description	Evalue	Bits	GA	Start	End
ResIII	Type III restriction enzyme, res subunit	4.1E-10	29	20.90	132	278
DEAD	DEAD/DEAH box helicase	0	142	20.60	136	319
Flavi_DEAD	Flavivirus DEAD domain	0.00011	11	20.70	148	208
Helicase_C	Helicase conserved C-terminal domain	0.37	0	20.90	184	226
Zn_Tnp_IS1	InsA N-terminal domain	1.7E-05	14	26.10	194	219
HAD	haloacid dehalogenase-like hydrolase	0.54	0	27.00	213	246
MEDS	MEDS: MEthanogen/methylotroph, DcmR Sensory domain	0.002	7	29.80	269	328
HAD	haloacid dehalogenase-like hydrolase	0.00021	11	27.00	288	359
DNA_pol3_chi	DNA polymerase III chi subunit, HolC	0.00013	11	21.40	344	390
MEDS	MEDS: MEthanogen/methylotroph, DcmR Sensory domain	0.023	4	29.80	350	393
Helicase_C	Helicase conserved C-terminal domain	9.7E-29	89	20.90	354	466