c2pfam

AT4G09960.1 :

Domain Description Evalue Bits GA Start End
SRF-TF SRF-type transcription factor (DNA-binding and dimerisation domain) 1E-29 92 20.40 10 57
Speriolin_C Speriolin C-terminus 8.4E-05 12 27.00 40 103
ApbE ApbE family 0.00063 9 20.00 52 102
DUF4065 Protein of unknown function (DUF4065) 0.0014 9 25.70 54 123
TMIE TMIE protein 0.0012 8 27.00 81 114
PH_11 Pleckstrin homology domain 4.4E-05 14 30.00 82 170
K-box K-box region 2.3E-28 88 20.60 86 171
Vps51 Vps51/Vps67 0.0035 7 20.80 90 115
DUF3847 Protein of unknown function (DUF3847) 0.69 0 40.00 90 111
Mersacidin Two-component Enterococcus faecalis cytolysin (EFC) 4.1E-05 13 27.00 103 127
DUF1192 Protein of unknown function (DUF1192) 2.5E-05 14 24.30 110 141
Vps51 Vps51/Vps67 0.00012 12 20.80 112 145
DUF3847 Protein of unknown function (DUF3847) 9.9E-05 12 40.00 144 194
DUF4065 Protein of unknown function (DUF4065) 0.27 2 25.70 152 198
TMIE TMIE protein 0.096 2 27.00 155 195
ApbE ApbE family 0.092 2 20.00 167 196

230

SRF-TF
Speriolin_C
ApbE
DUF4065
TMIE
PH_11
K-box
Vps51
DUF3847
Mersacidin
DUF1192
Vps51
DUF3847
DUF4065
TMIE
ApbE

References:

SRF-TF

PH_11

Speriolin_C

Vps51
12377769 Vps51p links the VFT complex to the SNARE Tlg1p. J Biol Chem. 2002;277:48318-48324.
15932880 Cog1p plays a central role in the organization of the yeast conserved oligomeric Golgi complex. J Biol Chem. 2005;280:27613-27623.

DUF1192

DUF4065

DUF3847

TMIE

ApbE
9473043 The apbE gene encodes a lipoprotein involved in thiamine synthesis in Salmonella typhimurium. J Bacteriol 1998;180:885-891.
10572132 A periplasmic location is essential for the role of the ApbE lipoprotein in thiamine synthesis in Salmonella typhimurium. J Bacteriol 1999;181:7285-7290.
16779835 Crystal structure of the ApbE protein (TM1553) from Thermotoga maritima at 1.58 A resolution. Proteins. 2006;64:1083-1090.

K-box
7958839 Function and regulation of the Arabidopsis floral homeotic gene PISTILLATA. Genes Dev 1994;8:1548-1560.
2031185 Predicting coiled coils from protein sequences. Science 1991;252:1162-1164.

Mersacidin

Domain	Description	Evalue	Bits	GA	Start	End
SRF-TF	SRF-type transcription factor (DNA-binding and dimerisation domain)	1E-29	92	20.40	10	57
Speriolin_C	Speriolin C-terminus	8.4E-05	12	27.00	40	103
ApbE	ApbE family	0.00063	9	20.00	52	102
DUF4065	Protein of unknown function (DUF4065)	0.0014	9	25.70	54	123
TMIE	TMIE protein	0.0012	8	27.00	81	114
PH_11	Pleckstrin homology domain	4.4E-05	14	30.00	82	170
K-box	K-box region	2.3E-28	88	20.60	86	171
Vps51	Vps51/Vps67	0.0035	7	20.80	90	115
DUF3847	Protein of unknown function (DUF3847)	0.69	0	40.00	90	111
Mersacidin	Two-component Enterococcus faecalis cytolysin (EFC)	4.1E-05	13	27.00	103	127
DUF1192	Protein of unknown function (DUF1192)	2.5E-05	14	24.30	110	141
Vps51	Vps51/Vps67	0.00012	12	20.80	112	145
DUF3847	Protein of unknown function (DUF3847)	9.9E-05	12	40.00	144	194
DUF4065	Protein of unknown function (DUF4065)	0.27	2	25.70	152	198
TMIE	TMIE protein	0.096	2	27.00	155	195
ApbE	ApbE family	0.092	2	20.00	167	196