c2pfam

AT4G11110.1 :

Domain Description Evalue Bits GA Start End
Pkinase Protein kinase domain 0.00012 10 20.40 302 350
Pkinase Protein kinase domain 1.7E-09 26 20.40 454 549
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 7.8E-06 14 23.10 455 493
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.48 0 22.90 720 753
WD40 WD domain, G-beta repeat 0.0029 7 21.00 724 750
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 9.7E-05 11 22.90 772 821
Nup160 Nucleoporin Nup120/160 0.001 6 19.20 785 822
WD40 WD domain, G-beta repeat 0.00062 10 21.00 786 801
WD40 WD domain, G-beta repeat 1.1E-06 18 21.00 806 844
Nup160 Nucleoporin Nup120/160 0.54 -3 19.20 836 858
WD40 WD domain, G-beta repeat 0.0043 7 21.00 849 879
WD40_like WD40-like domain 1.8E-07 19 40.00 863 982
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.49 0 22.90 871 931
WD40 WD domain, G-beta repeat 4.1E-06 16 21.00 896 928
Nup160 Nucleoporin Nup120/160 0.00046 8 19.20 909 934
WD40 WD domain, G-beta repeat 0.22 1 21.00 942 969
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00061 9 22.90 1002 1034
WD40 WD domain, G-beta repeat 0.0095 6 21.00 1009 1032

1036

Pkinase
Pkinase
PK_Tyr_Ser-Thr
ANAPC4_WD40
WD40
ANAPC4_WD40
Nup160
WD40
WD40
Nup160
WD40
WD40_like
ANAPC4_WD40
WD40
Nup160
WD40
ANAPC4_WD40
WD40

References:

ANAPC4_WD40

Nup160
8557736 Nup120p: a yeast nucleoporin required for NPC distribution and mRNA transport. J Cell Biol. 1995;131:1659-1675.
11684705 Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. J Cell Biol 2001;155:339-354.
17360435 Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex. Proc Natl Acad Sci U S A. 2007;104:3811-3816.

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

WD40_like

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
Pkinase	Protein kinase domain	0.00012	10	20.40	302	350
Pkinase	Protein kinase domain	1.7E-09	26	20.40	454	549
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	7.8E-06	14	23.10	455	493
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.48	0	22.90	720	753
WD40	WD domain, G-beta repeat	0.0029	7	21.00	724	750
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	9.7E-05	11	22.90	772	821
Nup160	Nucleoporin Nup120/160	0.001	6	19.20	785	822
WD40	WD domain, G-beta repeat	0.00062	10	21.00	786	801
WD40	WD domain, G-beta repeat	1.1E-06	18	21.00	806	844
Nup160	Nucleoporin Nup120/160	0.54	-3	19.20	836	858
WD40	WD domain, G-beta repeat	0.0043	7	21.00	849	879
WD40_like	WD40-like domain	1.8E-07	19	40.00	863	982
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.49	0	22.90	871	931
WD40	WD domain, G-beta repeat	4.1E-06	16	21.00	896	928
Nup160	Nucleoporin Nup120/160	0.00046	8	19.20	909	934
WD40	WD domain, G-beta repeat	0.22	1	21.00	942	969
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00061	9	22.90	1002	1034
WD40	WD domain, G-beta repeat	0.0095	6	21.00	1009	1032