c2pfam

AT4G11920.1 :

Domain Description Evalue Bits GA Start End
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 8.7E-08 21 22.90 204 261
WD40 WD domain, G-beta repeat 0.01 5 21.00 212 237
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.058 1 29.50 213 241
Nup160 Nucleoporin Nup120/160 0.046 1 19.20 222 250
eIF2A Eukaryotic translation initiation factor eIF2A 0.0063 5 20.50 226 249
WD40 WD domain, G-beta repeat 0.00027 10 21.00 242 273
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 3.9E-07 19 22.90 279 343
WD40 WD domain, G-beta repeat 9.4E-10 28 21.00 284 320
eIF2A Eukaryotic translation initiation factor eIF2A 3E-07 19 20.50 306 448
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.0044 6 22.90 325 389
WD40 WD domain, G-beta repeat 1.8E-05 14 21.00 326 365
Nup160 Nucleoporin Nup120/160 2.1E-05 12 19.20 357 440
WD40 WD domain, G-beta repeat 0.16 2 21.00 371 407
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.25 0 22.90 376 401
WD40 WD domain, G-beta repeat 6.3E-09 25 21.00 414 450
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 3.9E-05 11 29.50 414 458
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.029 3 22.90 417 451

475

ANAPC4_WD40
WD40
Ge1_WD40
Nup160
eIF2A
WD40
ANAPC4_WD40
WD40
eIF2A
ANAPC4_WD40
WD40
Nup160
WD40
ANAPC4_WD40
WD40
Ge1_WD40
ANAPC4_WD40

References:

ANAPC4_WD40

Ge1_WD40

Nup160
8557736 Nup120p: a yeast nucleoporin required for NPC distribution and mRNA transport. J Cell Biol. 1995;131:1659-1675.
11684705 Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. J Cell Biol 2001;155:339-354.
17360435 Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex. Proc Natl Acad Sci U S A. 2007;104:3811-3816.

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

eIF2A
12133843 Characterization of mammalian eIF2A and identification of the yeast homolog. J Biol Chem. 2002;277:37079-37087.

Domain	Description	Evalue	Bits	GA	Start	End
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	8.7E-08	21	22.90	204	261
WD40	WD domain, G-beta repeat	0.01	5	21.00	212	237
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.058	1	29.50	213	241
Nup160	Nucleoporin Nup120/160	0.046	1	19.20	222	250
eIF2A	Eukaryotic translation initiation factor eIF2A	0.0063	5	20.50	226	249
WD40	WD domain, G-beta repeat	0.00027	10	21.00	242	273
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	3.9E-07	19	22.90	279	343
WD40	WD domain, G-beta repeat	9.4E-10	28	21.00	284	320
eIF2A	Eukaryotic translation initiation factor eIF2A	3E-07	19	20.50	306	448
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.0044	6	22.90	325	389
WD40	WD domain, G-beta repeat	1.8E-05	14	21.00	326	365
Nup160	Nucleoporin Nup120/160	2.1E-05	12	19.20	357	440
WD40	WD domain, G-beta repeat	0.16	2	21.00	371	407
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.25	0	22.90	376	401
WD40	WD domain, G-beta repeat	6.3E-09	25	21.00	414	450
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	3.9E-05	11	29.50	414	458
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.029	3	22.90	417	451