c2pfam

AT4G13260.1 :

Domain Description Evalue Bits GA Start End
Thi4 Thi4 family 2.2E-05 13 20.00 16 59
DAO FAD dependent oxidoreductase 0.00053 9 24.70 29 57
Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 7.5E-25 77 30.00 29 226
K_oxygenase L-lysine 6-monooxygenase (NADPH-requiring) 0.04 2 21.00 29 57
Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 7.5E-12 34 22.80 29 218
FAD_binding_3 FAD binding domain 1.3E-05 14 20.10 29 57
Pyr_redox Pyridine nucleotide-disulphide oxidoreductase 0.13 2 22.00 29 49
FMO-like Flavin-binding monooxygenase-like 1.3E-29 92 19.60 30 359
NAD_binding_8 NAD(P)-binding Rossmann-like domain 4.2E-07 20 21.90 30 61
NAD_binding_9 FAD-NAD(P)-binding 0.00032 10 21.80 30 110
K_oxygenase L-lysine 6-monooxygenase (NADPH-requiring) 9.8E-18 54 21.00 86 214
NAD_binding_9 FAD-NAD(P)-binding 0.54 0 21.80 95 129
DAO FAD dependent oxidoreductase 0.035 3 24.70 100 163
Thi4 Thi4 family 0.047 2 20.00 191 215
Pyr_redox Pyridine nucleotide-disulphide oxidoreductase 0.00057 10 22.00 195 226
NAD_binding_9 FAD-NAD(P)-binding 0.11 2 21.80 198 214
Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 0.001 8 22.80 308 352
Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 0.0028 6 30.00 319 362
NAD_binding_9 FAD-NAD(P)-binding 0.14 2 21.80 325 341
DAO FAD dependent oxidoreductase 0.27 0 24.70 327 344
K_oxygenase L-lysine 6-monooxygenase (NADPH-requiring) 0.019 3 21.00 329 342

415

Thi4
DAO
Pyr_redox_3
K_oxygenase
Pyr_redox_2
FAD_binding_3
Pyr_redox
FMO-like
NAD_binding_8
NAD_binding_9
K_oxygenase
NAD_binding_9
DAO
Thi4
Pyr_redox
NAD_binding_9
Pyr_redox_2
Pyr_redox_3
NAD_binding_9
DAO
K_oxygenase

References:

Pyr_redox
8805537 Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase. Structure 1996;4:277-286.

FMO-like
9538688 A hydrophobic sequence motif common to N-hydroxylating enzymes. Trends Biochem Sci 1998;23:56-57.

K_oxygenase

DAO
9153426 Active site plasticity in D-amino acid oxidase: a crystallographic analysis. Biochemistry 1997;36:5853-5860.

FAD_binding_3
1409567 Crystal structure of the reduced form of p-hydroxybenzoate hydroxylase refined at 2.3A resolution. Proteins 1992;14:178-190.

NAD_binding_9

NAD_binding_8

Pyr_redox_2
8805537 Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase. Structure 1996;4:277-286.

Pyr_redox_3

Thi4
7961415 Cloning, nucleotide sequence, and regulation of Schizosaccharomyces pombe thi4, a thiamine biosynthetic gene. J Bacteriol 1994;176:6631-6635.

Domain	Description	Evalue	Bits	GA	Start	End
Thi4	Thi4 family	2.2E-05	13	20.00	16	59
DAO	FAD dependent oxidoreductase	0.00053	9	24.70	29	57
Pyr_redox_3	Pyridine nucleotide-disulphide oxidoreductase	7.5E-25	77	30.00	29	226
K_oxygenase	L-lysine 6-monooxygenase (NADPH-requiring)	0.04	2	21.00	29	57
Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	7.5E-12	34	22.80	29	218
FAD_binding_3	FAD binding domain	1.3E-05	14	20.10	29	57
Pyr_redox	Pyridine nucleotide-disulphide oxidoreductase	0.13	2	22.00	29	49
FMO-like	Flavin-binding monooxygenase-like	1.3E-29	92	19.60	30	359
NAD_binding_8	NAD(P)-binding Rossmann-like domain	4.2E-07	20	21.90	30	61
NAD_binding_9	FAD-NAD(P)-binding	0.00032	10	21.80	30	110
K_oxygenase	L-lysine 6-monooxygenase (NADPH-requiring)	9.8E-18	54	21.00	86	214
NAD_binding_9	FAD-NAD(P)-binding	0.54	0	21.80	95	129
DAO	FAD dependent oxidoreductase	0.035	3	24.70	100	163
Thi4	Thi4 family	0.047	2	20.00	191	215
Pyr_redox	Pyridine nucleotide-disulphide oxidoreductase	0.00057	10	22.00	195	226
NAD_binding_9	FAD-NAD(P)-binding	0.11	2	21.80	198	214
Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	0.001	8	22.80	308	352
Pyr_redox_3	Pyridine nucleotide-disulphide oxidoreductase	0.0028	6	30.00	319	362
NAD_binding_9	FAD-NAD(P)-binding	0.14	2	21.80	325	341
DAO	FAD dependent oxidoreductase	0.27	0	24.70	327	344
K_oxygenase	L-lysine 6-monooxygenase (NADPH-requiring)	0.019	3	21.00	329	342