c2pfam

AT4G14220.1 :

Domain Description Evalue Bits GA Start End
zf-rbx1 RING-H2 zinc finger domain 8E-11 32 31.00 40 86
zf-Nse Zinc-finger of the MIZ type in Nse subunit 3E-06 17 20.70 40 86
Prok-RING_1 Prokaryotic RING finger family 1 0.00037 11 29.10 41 73
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 6.3E-07 20 21.40 43 93
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 4.7E-06 17 27.00 43 87
zf-RING_2 Ring finger domain 3.1E-12 37 27.30 45 86
FANCL_C FANCL C-terminal domain 0.0099 6 20.70 45 81
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 0.0016 8 27.30 46 84
zf-RING-like RING-like domain 0.0054 7 21.60 46 86
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 1.9E-11 34 27.00 46 86
zf-RING_11 RING-like zinc finger 1.5E-10 31 27.00 46 73
zf-RING_UBOX RING-type zinc-finger 7.8E-09 26 25.20 46 77
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.1E-09 27 21.00 46 86
zf-RING_5 zinc-RING finger domain 1.1E-08 25 27.90 46 86
zf-C3HC4_4 zinc finger of C3HC4-type, RING 2E-05 15 30.00 46 86
zf-C3H2C3 Zinc-finger 0.0027 8 27.00 55 86
FANCL_C FANCL C-terminal domain 0.62 1 20.70 80 89
Prok-RING_1 Prokaryotic RING finger family 1 0.34 1 29.10 80 90
zf-RING_11 RING-like zinc finger 0.11 3 27.00 82 90
zf-RING_UBOX RING-type zinc-finger 0.019 5 25.20 83 95
zf-C3HC4_4 zinc finger of C3HC4-type, RING 0.28 2 30.00 83 90
Nab1 Conserved region in Nab1 0.00019 12 25.00 255 299

371

zf-rbx1
zf-Nse
Prok-RING_1
zf-ANAPC11
zf-C3HC4_3
zf-RING_2
FANCL_C
Zn_ribbon_17
zf-RING-like
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_4
zf-C3H2C3
FANCL_C
Prok-RING_1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_4
Nab1

References:

FANCL_C
16474167 The WD40 repeats of FANCL are required for Fanconi anemia core complex assembly. J Biol Chem. 2006;281:10896-10905.

Zn_ribbon_17

zf-C3H2C3

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-ANAPC11

zf-RING_UBOX

zf-rbx1

zf-RING_5

zf-RING_2

zf-Nse
12966087 Novel essential DNA repair proteins Nse1 and Nse2 are subunits of the fission yeast Smc5-Smc6 complex. J Biol Chem 2003;278:45460-45467.

zf-RING-like

zf-RING_11

zf-C3HC4_4

zf-C3HC4_3

zf-C3HC4_2

Prok-RING_1

Nab1
9418898 Nab1, a corepressor of NGFI-A (Egr-1), contains an active transcriptional repression domain. Mol Cell Biol 1998;18:512-524.

Domain	Description	Evalue	Bits	GA	Start	End
zf-rbx1	RING-H2 zinc finger domain	8E-11	32	31.00	40	86
zf-Nse	Zinc-finger of the MIZ type in Nse subunit	3E-06	17	20.70	40	86
Prok-RING_1	Prokaryotic RING finger family 1	0.00037	11	29.10	41	73
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	6.3E-07	20	21.40	43	93
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	4.7E-06	17	27.00	43	87
zf-RING_2	Ring finger domain	3.1E-12	37	27.30	45	86
FANCL_C	FANCL C-terminal domain	0.0099	6	20.70	45	81
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	0.0016	8	27.30	46	84
zf-RING-like	RING-like domain	0.0054	7	21.60	46	86
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	1.9E-11	34	27.00	46	86
zf-RING_11	RING-like zinc finger	1.5E-10	31	27.00	46	73
zf-RING_UBOX	RING-type zinc-finger	7.8E-09	26	25.20	46	77
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	2.1E-09	27	21.00	46	86
zf-RING_5	zinc-RING finger domain	1.1E-08	25	27.90	46	86
zf-C3HC4_4	zinc finger of C3HC4-type, RING	2E-05	15	30.00	46	86
zf-C3H2C3	Zinc-finger	0.0027	8	27.00	55	86
FANCL_C	FANCL C-terminal domain	0.62	1	20.70	80	89
Prok-RING_1	Prokaryotic RING finger family 1	0.34	1	29.10	80	90
zf-RING_11	RING-like zinc finger	0.11	3	27.00	82	90
zf-RING_UBOX	RING-type zinc-finger	0.019	5	25.20	83	95
zf-C3HC4_4	zinc finger of C3HC4-type, RING	0.28	2	30.00	83	90
Nab1	Conserved region in Nab1	0.00019	12	25.00	255	299