c2pfam

AT4G14920.1 :

Domain Description Evalue Bits GA Start End
MBD Methyl-CpG binding domain 5.4E-05 11 20.70 373 408
TDBD Tify domain binding domain 5.6E-24 73 23.60 610 660
PHD PHD-finger 8.5E-11 30 27.90 688 730
zf-PHD-like PHD/FYVE-zinc-finger like domain 4E-06 15 27.00 688 715
PHD_2 PHD-finger 1.1E-05 13 28.00 697 728
PHD PHD-finger 0.0012 7 27.90 729 783
zf-PHD-like PHD/FYVE-zinc-finger like domain 0.013 4 27.00 729 761
PHD_2 PHD-finger 0.012 4 28.00 747 759

1138

MBD
TDBD
PHD
zf-PHD-like
PHD_2
PHD
zf-PHD-like
PHD_2

References:

PHD_2

zf-PHD-like

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

MBD
8177735 Dissection of the methyl-CpG binding domain from the chromosomal protein MeCP2. Nucleic Acids Res 1993;21:4886-4892.
10050851 A mammalian protein with specific demethylase activity for mCpG DNA. Nature 1999;397:579-583.

TDBD

Domain	Description	Evalue	Bits	GA	Start	End
MBD	Methyl-CpG binding domain	5.4E-05	11	20.70	373	408
TDBD	Tify domain binding domain	5.6E-24	73	23.60	610	660
PHD	PHD-finger	8.5E-11	30	27.90	688	730
zf-PHD-like	PHD/FYVE-zinc-finger like domain	4E-06	15	27.00	688	715
PHD_2	PHD-finger	1.1E-05	13	28.00	697	728
PHD	PHD-finger	0.0012	7	27.90	729	783
zf-PHD-like	PHD/FYVE-zinc-finger like domain	0.013	4	27.00	729	761
PHD_2	PHD-finger	0.012	4	28.00	747	759