c2pfam

AT4G15900.1 :

Domain Description Evalue Bits GA Start End
WD40 WD domain, G-beta repeat 1.5E-13 39 21.00 167 204
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00093 8 22.90 174 210
Nucleoporin_N Nup133 N terminal like 0.00029 8 23.70 179 236
Nup160 Nucleoporin Nup120/160 0.0046 4 19.20 192 210
WD40 WD domain, G-beta repeat 4.3E-08 22 21.00 212 246
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.002 7 22.90 217 266
Nup160 Nucleoporin Nup120/160 0.0035 4 19.20 226 255
WD40 WD domain, G-beta repeat 8.4E-11 31 21.00 251 288
Nup160 Nucleoporin Nup120/160 0.02 2 19.20 274 295
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00027 9 22.90 284 350
WD40 WD domain, G-beta repeat 1.7E-08 23 21.00 297 330
Nup160 Nucleoporin Nup120/160 0.00084 6 19.20 317 372
WD40 WD domain, G-beta repeat 0.00087 9 21.00 334 367
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00099 8 22.90 343 392
WD40 WD domain, G-beta repeat 6.7E-05 12 21.00 384 413
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.16 1 22.90 386 424
Nucleoporin_N Nup133 N terminal like 0.0077 3 23.70 386 463
WD40 WD domain, G-beta repeat 5E-05 12 21.00 437 463
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.65 -1 22.90 438 463

486

WD40
ANAPC4_WD40
Nucleoporin_N
Nup160
WD40
ANAPC4_WD40
Nup160
WD40
Nup160
ANAPC4_WD40
WD40
Nup160
WD40
ANAPC4_WD40
WD40
ANAPC4_WD40
Nucleoporin_N
WD40
ANAPC4_WD40

References:

Nup160
8557736 Nup120p: a yeast nucleoporin required for NPC distribution and mRNA transport. J Cell Biol. 1995;131:1659-1675.
11684705 Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. J Cell Biol 2001;155:339-354.
17360435 Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex. Proc Natl Acad Sci U S A. 2007;104:3811-3816.

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

Nucleoporin_N
15557116 Structural and functional analysis of Nup133 domains reveals modular building blocks of the nuclear pore complex. J Cell Biol. 2004;167:591-597.

ANAPC4_WD40

Domain	Description	Evalue	Bits	GA	Start	End
WD40	WD domain, G-beta repeat	1.5E-13	39	21.00	167	204
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00093	8	22.90	174	210
Nucleoporin_N	Nup133 N terminal like	0.00029	8	23.70	179	236
Nup160	Nucleoporin Nup120/160	0.0046	4	19.20	192	210
WD40	WD domain, G-beta repeat	4.3E-08	22	21.00	212	246
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.002	7	22.90	217	266
Nup160	Nucleoporin Nup120/160	0.0035	4	19.20	226	255
WD40	WD domain, G-beta repeat	8.4E-11	31	21.00	251	288
Nup160	Nucleoporin Nup120/160	0.02	2	19.20	274	295
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00027	9	22.90	284	350
WD40	WD domain, G-beta repeat	1.7E-08	23	21.00	297	330
Nup160	Nucleoporin Nup120/160	0.00084	6	19.20	317	372
WD40	WD domain, G-beta repeat	0.00087	9	21.00	334	367
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00099	8	22.90	343	392
WD40	WD domain, G-beta repeat	6.7E-05	12	21.00	384	413
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.16	1	22.90	386	424
Nucleoporin_N	Nup133 N terminal like	0.0077	3	23.70	386	463
WD40	WD domain, G-beta repeat	5E-05	12	21.00	437	463
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.65	-1	22.90	438	463