c2pfam

AT4G17140.1 :

Domain Description Evalue Bits GA Start End
Chorein_N N-terminal region of Chorein or VPS13 3E-34 107 26.50 2 107
VPS13 Vacuolar sorting-associated protein 13, N-terminal 0 222 26.50 133 374
VPS13_mid_rpt Repeating coiled region of VPS13 0.052 2 26.20 251 309
VPS13_mid_rpt Repeating coiled region of VPS13 1.5E-38 121 26.20 561 782
VPS13 Vacuolar sorting-associated protein 13, N-terminal 0.14 1 26.50 742 786
PH PH domain 7.3E-08 22 25.00 803 901
VPS13_mid_rpt Repeating coiled region of VPS13 0.014 4 26.20 1124 1168
VPS13_mid_rpt Repeating coiled region of VPS13 2E-05 13 26.20 1304 1492
VPS13 Vacuolar sorting-associated protein 13, N-terminal 0.0094 5 26.50 1448 1493
Vps62 Vacuolar protein sorting-associated protein 62 2.4E-13 38 22.10 1968 2121
Vps62 Vacuolar protein sorting-associated protein 62 5.4E-13 37 22.10 2192 2339
VPS13 Vacuolar sorting-associated protein 13, N-terminal 0.23 0 26.50 2441 2504
VPS13_C Vacuolar-sorting-associated 13 protein C-terminal 0.3 0 32.20 3430 3471
VPS13_C Vacuolar-sorting-associated 13 protein C-terminal 2.2E-06 16 32.20 3584 3741
ATG_C ATG C terminal domain 1.1E-05 15 21.20 3711 3782
Vps62 Vacuolar protein sorting-associated protein 62 8.3E-05 10 22.10 4009 4080
Vps62 Vacuolar protein sorting-associated protein 62 8.4E-08 20 22.10 4086 4175

4216

Chorein_N
VPS13
VPS13_mid_rpt
VPS13_mid_rpt
VPS13
PH
VPS13_mid_rpt
VPS13_mid_rpt
VPS13
Vps62
Vps62
VPS13
VPS13_C
VPS13_C
ATG_C
Vps62
Vps62

References:

VPS13_mid_rpt

VPS13_C

VPS13

ATG_C
11382760 Apg2 is a novel protein required for the cytoplasm to vacuole targeting, autophagy, and pexophagy pathways. J Biol Chem. 2001;276:30442-30451.

Chorein_N

PH
7985225 PH domain: the first anniversary. Trends Biochem Sci 1994;19:349-353.

Vps62

Domain	Description	Evalue	Bits	GA	Start	End
Chorein_N	N-terminal region of Chorein or VPS13	3E-34	107	26.50	2	107
VPS13	Vacuolar sorting-associated protein 13, N-terminal	0	222	26.50	133	374
VPS13_mid_rpt	Repeating coiled region of VPS13	0.052	2	26.20	251	309
VPS13_mid_rpt	Repeating coiled region of VPS13	1.5E-38	121	26.20	561	782
VPS13	Vacuolar sorting-associated protein 13, N-terminal	0.14	1	26.50	742	786
PH	PH domain	7.3E-08	22	25.00	803	901
VPS13_mid_rpt	Repeating coiled region of VPS13	0.014	4	26.20	1124	1168
VPS13_mid_rpt	Repeating coiled region of VPS13	2E-05	13	26.20	1304	1492
VPS13	Vacuolar sorting-associated protein 13, N-terminal	0.0094	5	26.50	1448	1493
Vps62	Vacuolar protein sorting-associated protein 62	2.4E-13	38	22.10	1968	2121
Vps62	Vacuolar protein sorting-associated protein 62	5.4E-13	37	22.10	2192	2339
VPS13	Vacuolar sorting-associated protein 13, N-terminal	0.23	0	26.50	2441	2504
VPS13_C	Vacuolar-sorting-associated 13 protein C-terminal	0.3	0	32.20	3430	3471
VPS13_C	Vacuolar-sorting-associated 13 protein C-terminal	2.2E-06	16	32.20	3584	3741
ATG_C	ATG C terminal domain	1.1E-05	15	21.20	3711	3782
Vps62	Vacuolar protein sorting-associated protein 62	8.3E-05	10	22.10	4009	4080
Vps62	Vacuolar protein sorting-associated protein 62	8.4E-08	20	22.10	4086	4175