c2pfam

AT4G17170.1 :

Domain Description Evalue Bits GA Start End
Arf ADP-ribosylation factor family 4.3E-16 48 20.30 7 154
Ras Ras family 0 211 20.80 8 168
Roc Ras of Complex, Roc, domain of DAPkinase 5.7E-36 113 27.00 8 123
DAP3 Mitochondrial ribosomal death-associated protein 3 8.4E-05 11 23.10 8 26
Gtr1_RagA Gtr1/RagA G protein conserved region 2.5E-06 16 20.10 9 128
RsgA_GTPase RsgA GTPase 0.00012 11 30.00 10 38
MMR_HSR1 GTPase of unknown function 3E-08 23 24.50 10 114
AAA_22 AAA domain 0.00024 11 27.00 10 29
GTP_EFTU Elongation factor Tu GTP binding domain 4.3E-07 19 20.20 48 137
TetR_C_16 Tetracyclin repressor-like, C-terminal domain 2.6E-05 14 26.20 57 114
AAA_22 AAA domain 0.29 1 27.00 91 125
RsgA_GTPase RsgA GTPase 0.0026 7 30.00 109 158

211

Arf
Ras
Roc
DAP3
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
AAA_22
GTP_EFTU
TetR_C_16
AAA_22
RsgA_GTPase

References:

MMR_HSR1
8180467 Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. Mamm Genome 1994;5:100-105.

Gtr1_RagA
1620108 Putative GTP-binding protein, Gtr1, associated with the function of the Pho84 inorganic phosphate transporter in Saccharomyces cerevisiae. Mol Cell Biol 1992;12:2958-2966.
7499430 Cloning of a novel family of mammalian GTP-binding proteins (RagA, RagBs, RagB1) with remote similarity to the Ras-related GTPases. J Biol Chem 1995;270:28982-28988.
10388807 Saccharomyces cerevisiae putative G protein, Gtr1p, which forms complexes with itself and a novel protein designated as Gtr2p, negatively regulates the Ran/Gsp1p G protein cycle through Gtr2p. Genetics 1999;152:853-867.
11073942 Novel G proteins, Rag C and Rag D, interact with GTP-binding proteins, Rag A and Rag B. J Biol Chem 2001;276:7246-7257.

DAP3
9889192 Structure-function analysis of an evolutionary conserved protein, DAP3, which mediates TNF-alpha- and Fas-induced cell death. EMBO J. 1999;18:353-362.
11017876 The apoptosis mediator mDAP-3 is a novel member of a conserved family of mitochondrial proteins. J Cell Sci. 2000;113:3603-3612.

GTP_EFTU
9311785 Visualization of elongation factor Tu on the Escherichia coli ribosome. Nature 1997;389:403-406.

AAA_22

TetR_C_16

Ras
11387043 The Rab GTPase family. Genome Biol 2001;2:REVIEWS3007.

RsgA_GTPase

Arf
7990966 Structure of the human ADP-ribosylation factor 1 complexed with GDP. Nature 1994;372:704-708.
7759471 Structure and function of ARF proteins: Activators of cholera toxin and critical components of intracellular vesicular transport processes. J. Biol. Chem. 1995;270:12327-12330.
7770914 Arf proteins: the membrane traffic police? Trends Biochem Sci 1995;20:147-150.
1899243 Human ADP-ribosylation factors. A functionally conserved family of GTP-binding proteins. J Biol Chem 1991;266:2606-2614.

Roc

Domain	Description	Evalue	Bits	GA	Start	End
Arf	ADP-ribosylation factor family	4.3E-16	48	20.30	7	154
Ras	Ras family	0	211	20.80	8	168
Roc	Ras of Complex, Roc, domain of DAPkinase	5.7E-36	113	27.00	8	123
DAP3	Mitochondrial ribosomal death-associated protein 3	8.4E-05	11	23.10	8	26
Gtr1_RagA	Gtr1/RagA G protein conserved region	2.5E-06	16	20.10	9	128
RsgA_GTPase	RsgA GTPase	0.00012	11	30.00	10	38
MMR_HSR1	GTPase of unknown function	3E-08	23	24.50	10	114
AAA_22	AAA domain	0.00024	11	27.00	10	29
GTP_EFTU	Elongation factor Tu GTP binding domain	4.3E-07	19	20.20	48	137
TetR_C_16	Tetracyclin repressor-like, C-terminal domain	2.6E-05	14	26.20	57	114
AAA_22	AAA domain	0.29	1	27.00	91	125
RsgA_GTPase	RsgA GTPase	0.0026	7	30.00	109	158