c2pfam

AT4G17680.1 :

Domain Description Evalue Bits GA Start End
Apolipoprotein Apolipoprotein A1/A4/E domain 2.1E-05 14 90.00 120 224
UPF0242 Uncharacterised protein family (UPF0242) 0.002 7 23.70 152 226
ScfRs Short-chain fatty acyl coenzyme A regulators 5.7E-05 12 21.30 243 281
zf-RING_2 Ring finger domain 6.1E-05 13 27.30 266 302
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 2.2E-10 30 27.00 266 303
Prok-RING_4 Prokaryotic RING finger family 4 2.4E-07 20 27.00 267 302
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.7E-05 13 21.00 267 302
zf-RING_5 zinc-RING finger domain 0.00013 11 27.90 267 302
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 0.19 1 21.00 299 305

314

Apolipoprotein
UPF0242
ScfRs
zf-RING_2
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4

References:

zf-RING_5

zf-C3HC4_3

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

ScfRs

zf-RING_2

Prok-RING_4

UPF0242

Apolipoprotein
2063194 Three-dimensional structure of the LDL receptor-binding domain of human apolipoprotein E. Science 1991;252:1817-1822.

Domain	Description	Evalue	Bits	GA	Start	End
Apolipoprotein	Apolipoprotein A1/A4/E domain	2.1E-05	14	90.00	120	224
UPF0242	Uncharacterised protein family (UPF0242)	0.002	7	23.70	152	226
ScfRs	Short-chain fatty acyl coenzyme A regulators	5.7E-05	12	21.30	243	281
zf-RING_2	Ring finger domain	6.1E-05	13	27.30	266	302
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	2.2E-10	30	27.00	266	303
Prok-RING_4	Prokaryotic RING finger family 4	2.4E-07	20	27.00	267	302
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	2.7E-05	13	21.00	267	302
zf-RING_5	zinc-RING finger domain	0.00013	11	27.90	267	302
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	0.19	1	21.00	299	305