c2pfam

AT4G20140.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 2.4E-15 46 20.70 24 66
LRR_4 Leucine Rich repeats (2 copies) 0.00045 10 27.00 76 112
LRR_8 Leucine rich repeat 6E-10 28 27.00 88 131
LRR_4 Leucine Rich repeats (2 copies) 3.4E-07 20 27.00 96 131
LRR_1 Leucine Rich Repeat 0.00042 11 20.60 96 118
LRR_6 Leucine Rich repeat 0.038 4 23.40 96 107
LRR_6 Leucine Rich repeat 0.18 2 23.40 118 134
LRR_4 Leucine Rich repeats (2 copies) 7.2E-08 22 27.00 119 160
LRR_1 Leucine Rich Repeat 0.31 2 20.60 120 141
LRR_1 Leucine Rich Repeat 0.14 3 20.60 144 166
LRR_6 Leucine Rich repeat 0.83 0 23.40 144 158
LRR_8 Leucine rich repeat 2.7E-07 20 27.00 144 203
LRR_4 Leucine Rich repeats (2 copies) 0.12 3 27.00 168 203
LRR_8 Leucine rich repeat 1.5E-05 14 27.00 192 251
LRR_4 Leucine Rich repeats (2 copies) 0.79 0 27.00 193 225
LRR_1 Leucine Rich Repeat 0.58 1 20.60 194 214
PIP49_C Pancreatitis induced protein 49 C terminal 0.17 1 28.10 198 225
DUF5612 Domain of unknown function (DUF5612) 0.016 5 25.00 223 285
LRR_8 Leucine rich repeat 8.6E-08 22 27.00 237 275
LRR_4 Leucine Rich repeats (2 copies) 2.8E-08 24 27.00 240 277
LRR_1 Leucine Rich Repeat 0.00085 10 20.60 240 259
LRR_6 Leucine Rich repeat 0.036 4 23.40 240 254
LRR_1 Leucine Rich Repeat 0.98 0 20.60 264 284
LRR_8 Leucine rich repeat 2.2E-13 39 27.00 264 323
LRR_4 Leucine Rich repeats (2 copies) 1.6E-06 18 27.00 288 327
LRR_1 Leucine Rich Repeat 0.00058 10 20.60 288 309
LRR_6 Leucine Rich repeat 0.0098 6 23.40 288 302
LRR_8 Leucine rich repeat 9.7E-08 21 27.00 313 372
LRR_1 Leucine Rich Repeat 0.63 1 20.60 316 333
LRR_6 Leucine Rich repeat 0.058 4 23.40 334 351
LRR_4 Leucine Rich repeats (2 copies) 9.4E-09 25 27.00 336 375
LRR_1 Leucine Rich Repeat 0.95 1 20.60 337 359
DUF5612 Domain of unknown function (DUF5612) 0.0091 5 25.00 337 379
LRR_6 Leucine Rich repeat 0.0034 7 23.40 358 374
LRR_1 Leucine Rich Repeat 0.0025 8 20.60 361 380
LRR_8 Leucine rich repeat 3.1E-09 26 27.00 361 420
LRR_4 Leucine Rich repeats (2 copies) 0.0016 9 27.00 385 420
LRR_1 Leucine Rich Repeat 0.037 5 20.60 386 407
DUF5612 Domain of unknown function (DUF5612) 0.6 -1 25.00 404 450
LRR_4 Leucine Rich repeats (2 copies) 1.4E-05 15 27.00 408 445
LRR_8 Leucine rich repeat 1E-08 25 27.00 408 468
LRR_1 Leucine Rich Repeat 0.048 4 20.60 409 431
LRR_1 Leucine Rich Repeat 0.54 1 20.60 433 455
LRR_4 Leucine Rich repeats (2 copies) 0.00017 12 27.00 433 466
LRR_6 Leucine Rich repeat 0.84 0 23.40 454 471
LRR_1 Leucine Rich Repeat 0.13 3 20.60 457 478
LRR_8 Leucine rich repeat 3.9E-05 13 27.00 477 516
LRR_1 Leucine Rich Repeat 0.024 5 20.60 478 503
LRR_4 Leucine Rich repeats (2 copies) 0.00071 10 27.00 482 520
LRR_6 Leucine Rich repeat 0.0086 6 23.40 503 518
LRR_8 Leucine rich repeat 2E-11 33 27.00 505 564
LRR_1 Leucine Rich Repeat 0.0057 7 20.60 506 527
LRR_4 Leucine Rich repeats (2 copies) 0.00014 12 27.00 529 566
LRR_6 Leucine Rich repeat 0.017 5 23.40 551 566
LRR_1 Leucine Rich Repeat 0.025 5 20.60 553 571
LRR_8 Leucine rich repeat 4.8E-05 13 27.00 597 635
LRR_6 Leucine Rich repeat 0.8 0 23.40 598 614
LRR_4 Leucine Rich repeats (2 copies) 1.4E-06 18 27.00 599 639
LRR_1 Leucine Rich Repeat 0.05 4 20.60 600 620
LRR_6 Leucine Rich repeat 0.89 0 23.40 628 637
LRR_6 Leucine Rich repeat 0.81 0 23.40 646 657
LRR_4 Leucine Rich repeats (2 copies) 7.1E-07 19 27.00 647 688
LRR_8 Leucine rich repeat 5.3E-06 16 27.00 647 683
LRR_1 Leucine Rich Repeat 8.4E-05 13 20.60 648 670
LRR_8 Leucine rich repeat 8.2E-09 25 27.00 672 731
LRR_6 Leucine Rich repeat 0.76 0 23.40 693 709
LRR_4 Leucine Rich repeats (2 copies) 0.0022 8 27.00 695 732
LRR_8 Leucine rich repeat 2.1E-07 20 27.00 696 755
LRR_1 Leucine Rich Repeat 0.16 3 20.60 696 718
LRR_1 Leucine Rich Repeat 0.8 1 20.60 721 739
LRR_8 Leucine rich repeat 1.5E-05 14 27.00 721 756
LRR_6 Leucine Rich repeat 0.59 0 23.40 743 758
LRR_1 Leucine Rich Repeat 0.11 3 20.60 744 761
LRR_4 Leucine Rich repeats (2 copies) 1.8E-05 15 27.00 744 784
LRR_6 Leucine Rich repeat 0.049 4 23.40 772 783
LRR_1 Leucine Rich Repeat 0.064 4 20.60 773 789
LRR_8 Leucine rich repeat 2E-13 40 27.00 773 828
LRR_6 Leucine Rich repeat 6.8E-05 13 23.40 792 807
LRR_1 Leucine Rich Repeat 0.00047 11 20.60 793 811
LRR_4 Leucine Rich repeats (2 copies) 8.4E-09 25 27.00 793 828
LRR_1 Leucine Rich Repeat 0.21 3 20.60 820 837
LRR_6 Leucine Rich repeat 0.036 4 23.40 820 830
Pkinase Protein kinase domain 0 159 20.40 956 1233
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 148 23.10 956 1231
ABC1 ABC1 family 8E-05 12 20.60 956 979
PIP49_C Pancreatitis induced protein 49 C terminal 0.00067 9 28.10 1006 1104
Kinase-like Kinase-like 7E-05 12 25.00 1049 1166

1249

LRRNT_2
LRR_4
LRR_8
LRR_4
LRR_1
LRR_6
LRR_6
LRR_4
LRR_1
LRR_1
LRR_6
LRR_8
LRR_4
LRR_8
LRR_4
LRR_1
PIP49_C
DUF5612
LRR_8
LRR_4
LRR_1
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_8
LRR_1
LRR_6
LRR_4
LRR_1
DUF5612
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
DUF5612
LRR_4
LRR_8
LRR_1
LRR_1
LRR_4
LRR_6
LRR_1
LRR_8
LRR_1
LRR_4
LRR_6
LRR_8
LRR_1
LRR_4
LRR_6
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_6
LRR_4
LRR_8
LRR_1
LRR_8
LRR_6
LRR_4
LRR_8
LRR_1
LRR_1
LRR_8
LRR_6
LRR_1
LRR_4
LRR_6
LRR_1
LRR_8
LRR_6
LRR_1
LRR_4
LRR_1
LRR_6
Pkinase
PK_Tyr_Ser-Thr
ABC1
PIP49_C
Kinase-like

References:

LRR_8

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

PIP49_C
11281735 Cloning and expression of the mouse PIP49 (Pancreatitis Induced Protein 49) mRNA which encodes a new putative transmembrane protein activated in the pancreas with acute pancreatitis. Mol Cell Biol Res Commun. 2000;4:188-193.

Kinase-like

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_4

DUF5612

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	2.4E-15	46	20.70	24	66
LRR_4	Leucine Rich repeats (2 copies)	0.00045	10	27.00	76	112
LRR_8	Leucine rich repeat	6E-10	28	27.00	88	131
LRR_4	Leucine Rich repeats (2 copies)	3.4E-07	20	27.00	96	131
LRR_1	Leucine Rich Repeat	0.00042	11	20.60	96	118
LRR_6	Leucine Rich repeat	0.038	4	23.40	96	107
LRR_6	Leucine Rich repeat	0.18	2	23.40	118	134
LRR_4	Leucine Rich repeats (2 copies)	7.2E-08	22	27.00	119	160
LRR_1	Leucine Rich Repeat	0.31	2	20.60	120	141
LRR_1	Leucine Rich Repeat	0.14	3	20.60	144	166
LRR_6	Leucine Rich repeat	0.83	0	23.40	144	158
LRR_8	Leucine rich repeat	2.7E-07	20	27.00	144	203
LRR_4	Leucine Rich repeats (2 copies)	0.12	3	27.00	168	203
LRR_8	Leucine rich repeat	1.5E-05	14	27.00	192	251
LRR_4	Leucine Rich repeats (2 copies)	0.79	0	27.00	193	225
LRR_1	Leucine Rich Repeat	0.58	1	20.60	194	214
PIP49_C	Pancreatitis induced protein 49 C terminal	0.17	1	28.10	198	225
DUF5612	Domain of unknown function (DUF5612)	0.016	5	25.00	223	285
LRR_8	Leucine rich repeat	8.6E-08	22	27.00	237	275
LRR_4	Leucine Rich repeats (2 copies)	2.8E-08	24	27.00	240	277
LRR_1	Leucine Rich Repeat	0.00085	10	20.60	240	259
LRR_6	Leucine Rich repeat	0.036	4	23.40	240	254
LRR_1	Leucine Rich Repeat	0.98	0	20.60	264	284
LRR_8	Leucine rich repeat	2.2E-13	39	27.00	264	323
LRR_4	Leucine Rich repeats (2 copies)	1.6E-06	18	27.00	288	327
LRR_1	Leucine Rich Repeat	0.00058	10	20.60	288	309
LRR_6	Leucine Rich repeat	0.0098	6	23.40	288	302
LRR_8	Leucine rich repeat	9.7E-08	21	27.00	313	372
LRR_1	Leucine Rich Repeat	0.63	1	20.60	316	333
LRR_6	Leucine Rich repeat	0.058	4	23.40	334	351
LRR_4	Leucine Rich repeats (2 copies)	9.4E-09	25	27.00	336	375
LRR_1	Leucine Rich Repeat	0.95	1	20.60	337	359
DUF5612	Domain of unknown function (DUF5612)	0.0091	5	25.00	337	379
LRR_6	Leucine Rich repeat	0.0034	7	23.40	358	374
LRR_1	Leucine Rich Repeat	0.0025	8	20.60	361	380
LRR_8	Leucine rich repeat	3.1E-09	26	27.00	361	420
LRR_4	Leucine Rich repeats (2 copies)	0.0016	9	27.00	385	420
LRR_1	Leucine Rich Repeat	0.037	5	20.60	386	407
DUF5612	Domain of unknown function (DUF5612)	0.6	-1	25.00	404	450
LRR_4	Leucine Rich repeats (2 copies)	1.4E-05	15	27.00	408	445
LRR_8	Leucine rich repeat	1E-08	25	27.00	408	468
LRR_1	Leucine Rich Repeat	0.048	4	20.60	409	431
LRR_1	Leucine Rich Repeat	0.54	1	20.60	433	455
LRR_4	Leucine Rich repeats (2 copies)	0.00017	12	27.00	433	466
LRR_6	Leucine Rich repeat	0.84	0	23.40	454	471
LRR_1	Leucine Rich Repeat	0.13	3	20.60	457	478
LRR_8	Leucine rich repeat	3.9E-05	13	27.00	477	516
LRR_1	Leucine Rich Repeat	0.024	5	20.60	478	503
LRR_4	Leucine Rich repeats (2 copies)	0.00071	10	27.00	482	520
LRR_6	Leucine Rich repeat	0.0086	6	23.40	503	518
LRR_8	Leucine rich repeat	2E-11	33	27.00	505	564
LRR_1	Leucine Rich Repeat	0.0057	7	20.60	506	527
LRR_4	Leucine Rich repeats (2 copies)	0.00014	12	27.00	529	566
LRR_6	Leucine Rich repeat	0.017	5	23.40	551	566
LRR_1	Leucine Rich Repeat	0.025	5	20.60	553	571
LRR_8	Leucine rich repeat	4.8E-05	13	27.00	597	635
LRR_6	Leucine Rich repeat	0.8	0	23.40	598	614
LRR_4	Leucine Rich repeats (2 copies)	1.4E-06	18	27.00	599	639
LRR_1	Leucine Rich Repeat	0.05	4	20.60	600	620
LRR_6	Leucine Rich repeat	0.89	0	23.40	628	637
LRR_6	Leucine Rich repeat	0.81	0	23.40	646	657
LRR_4	Leucine Rich repeats (2 copies)	7.1E-07	19	27.00	647	688
LRR_8	Leucine rich repeat	5.3E-06	16	27.00	647	683
LRR_1	Leucine Rich Repeat	8.4E-05	13	20.60	648	670
LRR_8	Leucine rich repeat	8.2E-09	25	27.00	672	731
LRR_6	Leucine Rich repeat	0.76	0	23.40	693	709
LRR_4	Leucine Rich repeats (2 copies)	0.0022	8	27.00	695	732
LRR_8	Leucine rich repeat	2.1E-07	20	27.00	696	755
LRR_1	Leucine Rich Repeat	0.16	3	20.60	696	718
LRR_1	Leucine Rich Repeat	0.8	1	20.60	721	739
LRR_8	Leucine rich repeat	1.5E-05	14	27.00	721	756
LRR_6	Leucine Rich repeat	0.59	0	23.40	743	758
LRR_1	Leucine Rich Repeat	0.11	3	20.60	744	761
LRR_4	Leucine Rich repeats (2 copies)	1.8E-05	15	27.00	744	784
LRR_6	Leucine Rich repeat	0.049	4	23.40	772	783
LRR_1	Leucine Rich Repeat	0.064	4	20.60	773	789
LRR_8	Leucine rich repeat	2E-13	40	27.00	773	828
LRR_6	Leucine Rich repeat	6.8E-05	13	23.40	792	807
LRR_1	Leucine Rich Repeat	0.00047	11	20.60	793	811
LRR_4	Leucine Rich repeats (2 copies)	8.4E-09	25	27.00	793	828
LRR_1	Leucine Rich Repeat	0.21	3	20.60	820	837
LRR_6	Leucine Rich repeat	0.036	4	23.40	820	830
Pkinase	Protein kinase domain	0	159	20.40	956	1233
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	148	23.10	956	1231
ABC1	ABC1 family	8E-05	12	20.60	956	979
PIP49_C	Pancreatitis induced protein 49 C terminal	0.00067	9	28.10	1006	1104
Kinase-like	Kinase-like	7E-05	12	25.00	1049	1166