c2pfam

AT4G20270.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 8.8E-12 35 20.70 34 72
LRR_6 Leucine Rich repeat 0.015 5 23.40 75 90
LRR_8 Leucine rich repeat 0.001 8 27.00 76 112
LRR_4 Leucine Rich repeats (2 copies) 0.34 1 27.00 77 89
LRR_4 Leucine Rich repeats (2 copies) 0.00045 10 27.00 77 114
LRR_1 Leucine Rich Repeat 0.31 2 20.60 79 98
LRR_6 Leucine Rich repeat 0.086 3 23.40 100 116
LRR_4 Leucine Rich repeats (2 copies) 7.4E-05 13 27.00 101 135
LRR_1 Leucine Rich Repeat 0.046 4 20.60 103 121
LRR_8 Leucine rich repeat 4.7E-06 16 27.00 123 160
LRR_1 Leucine Rich Repeat 0.14 3 20.60 127 139
LRR_6 Leucine Rich repeat 0.15 2 23.40 127 139
LRR_4 Leucine Rich repeats (2 copies) 3.6E-05 14 27.00 150 184
LRR_8 Leucine rich repeat 6.1E-06 16 27.00 170 210
LRR_6 Leucine Rich repeat 0.044 4 23.40 174 186
LRR_8 Leucine rich repeat 3.7E-06 16 27.00 175 231
LRR_1 Leucine Rich Repeat 0.00038 11 20.60 175 193
LRR_1 Leucine Rich Repeat 0.0039 8 20.60 199 219
LRR_4 Leucine Rich repeats (2 copies) 0.00031 11 27.00 199 230
LRR_6 Leucine Rich repeat 0.043 4 23.40 199 211
LRR_8 Leucine rich repeat 1.7E-05 14 27.00 243 283
LRR_4 Leucine Rich repeats (2 copies) 1.4E-08 25 27.00 248 284
LRR_1 Leucine Rich Repeat 0.00053 10 20.60 248 270
LRR_6 Leucine Rich repeat 0.38 1 23.40 248 259
LRR_1 Leucine Rich Repeat 0.67 1 20.60 272 293
LRR_4 Leucine Rich repeats (2 copies) 6.7E-05 13 27.00 281 307
LRR_8 Leucine rich repeat 1.7E-06 17 27.00 293 331
LRR_4 Leucine Rich repeats (2 copies) 1.2E-06 18 27.00 295 330
LRR_6 Leucine Rich repeat 0.0074 6 23.40 295 305
LRR_1 Leucine Rich Repeat 4.7E-05 14 20.60 296 318
LRR_4 Leucine Rich repeats (2 copies) 1.3E-06 18 27.00 319 359
LRR_8 Leucine rich repeat 5.7E-09 25 27.00 344 401
LRR_4 Leucine Rich repeats (2 copies) 6E-05 13 27.00 345 382
LRR_1 Leucine Rich Repeat 0.25 2 20.60 345 361
LRR_1 Leucine Rich Repeat 0.002 9 20.60 368 388
LRR_4 Leucine Rich repeats (2 copies) 0.12 3 27.00 368 400
LRR_1 Leucine Rich Repeat 0.056 4 20.60 392 413
LRR_8 Leucine rich repeat 0.00063 9 27.00 420 449
LRR_4 Leucine Rich repeats (2 copies) 0.0035 7 27.00 422 452
LRR_4 Leucine Rich repeats (2 copies) 5.4E-06 16 27.00 439 482
LRR_1 Leucine Rich Repeat 0.14 3 20.60 440 456
LRR_8 Leucine rich repeat 5.4E-08 22 27.00 465 502
LRR_1 Leucine Rich Repeat 0.0027 8 20.60 467 489
LRR_6 Leucine Rich repeat 0.14 2 23.40 467 480
LRR_4 Leucine Rich repeats (2 copies) 6.1E-05 13 27.00 491 526
LRR_8 Leucine rich repeat 5.9E-09 25 27.00 512 550
LRR_6 Leucine Rich repeat 0.65 0 23.40 515 528
LRR_1 Leucine Rich Repeat 0.039 5 20.60 516 535
LRR_6 Leucine Rich repeat 5.5E-06 16 23.40 537 552
LRR_1 Leucine Rich Repeat 0.0048 7 20.60 539 555
LRR_4 Leucine Rich repeats (2 copies) 0.00024 11 27.00 539 569
LRR_8 Leucine rich repeat 0.0033 7 27.00 562 598
LRR_1 Leucine Rich Repeat 0.019 6 20.60 564 582
LRR_6 Leucine Rich repeat 0.33 1 23.40 564 573
DUF5379 Family of unknown function (DUF5379) 0.003 7 25.00 647 679
Pkinase Protein kinase domain 0 159 20.40 712 981
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 152 23.10 712 982
APH Phosphotransferase enzyme family 0.84 -1 22.40 750 790
APH Phosphotransferase enzyme family 5.1E-05 13 22.40 801 860
Pkinase_fungal Fungal protein kinase 3.7E-05 12 24.10 817 869
DUF5379 Family of unknown function (DUF5379) 0.011 6 25.00 870 927

992

LRRNT_2
LRR_6
LRR_8
LRR_4
LRR_4
LRR_1
LRR_6
LRR_4
LRR_1
LRR_8
LRR_1
LRR_6
LRR_4
LRR_8
LRR_6
LRR_8
LRR_1
LRR_1
LRR_4
LRR_6
LRR_8
LRR_4
LRR_1
LRR_6
LRR_1
LRR_4
LRR_8
LRR_4
LRR_6
LRR_1
LRR_4
LRR_8
LRR_4
LRR_1
LRR_1
LRR_4
LRR_1
LRR_8
LRR_4
LRR_4
LRR_1
LRR_8
LRR_1
LRR_6
LRR_4
LRR_8
LRR_6
LRR_1
LRR_6
LRR_1
LRR_4
LRR_8
LRR_1
LRR_6
DUF5379
Pkinase
PK_Tyr_Ser-Thr
APH
APH
Pkinase_fungal
DUF5379

References:

Pkinase_fungal

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

PK_Tyr_Ser-Thr

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_8

LRR_6

LRR_4

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

DUF5379

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	8.8E-12	35	20.70	34	72
LRR_6	Leucine Rich repeat	0.015	5	23.40	75	90
LRR_8	Leucine rich repeat	0.001	8	27.00	76	112
LRR_4	Leucine Rich repeats (2 copies)	0.34	1	27.00	77	89
LRR_4	Leucine Rich repeats (2 copies)	0.00045	10	27.00	77	114
LRR_1	Leucine Rich Repeat	0.31	2	20.60	79	98
LRR_6	Leucine Rich repeat	0.086	3	23.40	100	116
LRR_4	Leucine Rich repeats (2 copies)	7.4E-05	13	27.00	101	135
LRR_1	Leucine Rich Repeat	0.046	4	20.60	103	121
LRR_8	Leucine rich repeat	4.7E-06	16	27.00	123	160
LRR_1	Leucine Rich Repeat	0.14	3	20.60	127	139
LRR_6	Leucine Rich repeat	0.15	2	23.40	127	139
LRR_4	Leucine Rich repeats (2 copies)	3.6E-05	14	27.00	150	184
LRR_8	Leucine rich repeat	6.1E-06	16	27.00	170	210
LRR_6	Leucine Rich repeat	0.044	4	23.40	174	186
LRR_8	Leucine rich repeat	3.7E-06	16	27.00	175	231
LRR_1	Leucine Rich Repeat	0.00038	11	20.60	175	193
LRR_1	Leucine Rich Repeat	0.0039	8	20.60	199	219
LRR_4	Leucine Rich repeats (2 copies)	0.00031	11	27.00	199	230
LRR_6	Leucine Rich repeat	0.043	4	23.40	199	211
LRR_8	Leucine rich repeat	1.7E-05	14	27.00	243	283
LRR_4	Leucine Rich repeats (2 copies)	1.4E-08	25	27.00	248	284
LRR_1	Leucine Rich Repeat	0.00053	10	20.60	248	270
LRR_6	Leucine Rich repeat	0.38	1	23.40	248	259
LRR_1	Leucine Rich Repeat	0.67	1	20.60	272	293
LRR_4	Leucine Rich repeats (2 copies)	6.7E-05	13	27.00	281	307
LRR_8	Leucine rich repeat	1.7E-06	17	27.00	293	331
LRR_4	Leucine Rich repeats (2 copies)	1.2E-06	18	27.00	295	330
LRR_6	Leucine Rich repeat	0.0074	6	23.40	295	305
LRR_1	Leucine Rich Repeat	4.7E-05	14	20.60	296	318
LRR_4	Leucine Rich repeats (2 copies)	1.3E-06	18	27.00	319	359
LRR_8	Leucine rich repeat	5.7E-09	25	27.00	344	401
LRR_4	Leucine Rich repeats (2 copies)	6E-05	13	27.00	345	382
LRR_1	Leucine Rich Repeat	0.25	2	20.60	345	361
LRR_1	Leucine Rich Repeat	0.002	9	20.60	368	388
LRR_4	Leucine Rich repeats (2 copies)	0.12	3	27.00	368	400
LRR_1	Leucine Rich Repeat	0.056	4	20.60	392	413
LRR_8	Leucine rich repeat	0.00063	9	27.00	420	449
LRR_4	Leucine Rich repeats (2 copies)	0.0035	7	27.00	422	452
LRR_4	Leucine Rich repeats (2 copies)	5.4E-06	16	27.00	439	482
LRR_1	Leucine Rich Repeat	0.14	3	20.60	440	456
LRR_8	Leucine rich repeat	5.4E-08	22	27.00	465	502
LRR_1	Leucine Rich Repeat	0.0027	8	20.60	467	489
LRR_6	Leucine Rich repeat	0.14	2	23.40	467	480
LRR_4	Leucine Rich repeats (2 copies)	6.1E-05	13	27.00	491	526
LRR_8	Leucine rich repeat	5.9E-09	25	27.00	512	550
LRR_6	Leucine Rich repeat	0.65	0	23.40	515	528
LRR_1	Leucine Rich Repeat	0.039	5	20.60	516	535
LRR_6	Leucine Rich repeat	5.5E-06	16	23.40	537	552
LRR_1	Leucine Rich Repeat	0.0048	7	20.60	539	555
LRR_4	Leucine Rich repeats (2 copies)	0.00024	11	27.00	539	569
LRR_8	Leucine rich repeat	0.0033	7	27.00	562	598
LRR_1	Leucine Rich Repeat	0.019	6	20.60	564	582
LRR_6	Leucine Rich repeat	0.33	1	23.40	564	573
DUF5379	Family of unknown function (DUF5379)	0.003	7	25.00	647	679
Pkinase	Protein kinase domain	0	159	20.40	712	981
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	152	23.10	712	982
APH	Phosphotransferase enzyme family	0.84	-1	22.40	750	790
APH	Phosphotransferase enzyme family	5.1E-05	13	22.40	801	860
Pkinase_fungal	Fungal protein kinase	3.7E-05	12	24.10	817	869
DUF5379	Family of unknown function (DUF5379)	0.011	6	25.00	870	927