c2pfam

AT4G20940.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 6.3E-12 36 20.70 6 51
LRR_8 Leucine rich repeat 9.2E-09 25 27.00 72 113
LRR_6 Leucine Rich repeat 0.81 0 23.40 77 92
LRR_4 Leucine Rich repeats (2 copies) 5.7E-07 20 27.00 78 118
LRR_1 Leucine Rich Repeat 0.0066 8 20.60 79 100
LRR_1 Leucine Rich Repeat 0.088 4 20.60 103 120
LRR_6 Leucine Rich repeat 0.18 2 23.40 103 114
LRR_6 Leucine Rich repeat 0.094 3 23.40 127 141
LRR_8 Leucine rich repeat 3.2E-10 30 27.00 127 185
LRR_1 Leucine Rich Repeat 0.012 7 20.60 127 147
LRR_4 Leucine Rich repeats (2 copies) 1.6E-07 22 27.00 127 163
LRR_1 Leucine Rich Repeat 0.0016 9 20.60 151 171
LRR_6 Leucine Rich repeat 0.027 5 23.40 151 164
LRR_8 Leucine rich repeat 4E-07 20 27.00 168 210
LRR_4 Leucine Rich repeats (2 copies) 0.31 2 27.00 172 184
LRR_4 Leucine Rich repeats (2 copies) 0.00049 11 27.00 176 212
LRR_1 Leucine Rich Repeat 0.053 5 20.60 176 195
LRR_6 Leucine Rich repeat 0.047 4 23.40 176 188
LRR_8 Leucine rich repeat 2.3E-05 14 27.00 197 234
LRR_6 Leucine Rich repeat 0.22 2 23.40 198 212
LRR_1 Leucine Rich Repeat 0.073 4 20.60 199 213
LRR_4 Leucine Rich repeats (2 copies) 0.0017 9 27.00 199 236
LRR_8 Leucine rich repeat 3E-08 24 27.00 225 283
LRR_4 Leucine Rich repeats (2 copies) 0.0056 7 27.00 228 259
LRR_6 Leucine Rich repeat 0.0026 8 23.40 247 261
LRR_4 Leucine Rich repeats (2 copies) 2.1E-07 22 27.00 248 289
LRR_1 Leucine Rich Repeat 0.0051 8 20.60 249 266
LRR_4 Leucine Rich repeats (2 copies) 1E-07 22 27.00 271 310
LRR_6 Leucine Rich repeat 0.018 6 23.40 271 285
LRR_1 Leucine Rich Repeat 0.006 8 20.60 272 288
LRR_8 Leucine rich repeat 0.0037 7 27.00 290 332
LRR_1 Leucine Rich Repeat 0.02 6 20.60 296 315
LRR_4 Leucine Rich repeats (2 copies) 0.00011 13 27.00 296 333
LRR_4 Leucine Rich repeats (2 copies) 7.6E-05 13 27.00 322 355
LRR_1 Leucine Rich Repeat 0.012 7 20.60 322 338
LRR_8 Leucine rich repeat 0.012 6 27.00 322 355
LRR_6 Leucine Rich repeat 0.0014 9 23.40 322 334
LRR_6 Leucine Rich repeat 0.00082 10 23.40 341 357
LRR_4 Leucine Rich repeats (2 copies) 0.003 8 27.00 343 362
LRR_1 Leucine Rich Repeat 0.041 5 20.60 344 359
LRR_4 Leucine Rich repeats (2 copies) 0.0003 11 27.00 368 401
LRR_8 Leucine rich repeat 3.2E-06 17 27.00 368 422
LRR_6 Leucine Rich repeat 0.09 3 23.40 387 400
LRR_1 Leucine Rich Repeat 0.022 6 20.60 387 404
LRR_1 Leucine Rich Repeat 0.098 4 20.60 414 427
LRR_4 Leucine Rich repeats (2 copies) 4.4E-07 20 27.00 414 448
LRR_6 Leucine Rich repeat 0.056 4 23.40 414 424
LRR_8 Leucine rich repeat 3.3E-10 30 27.00 414 469
LRR_6 Leucine Rich repeat 0.029 5 23.40 435 448
LRR_1 Leucine Rich Repeat 0.00039 11 20.60 436 456
LRR_6 Leucine Rich repeat 0.22 2 23.40 458 473
LRR_4 Leucine Rich repeats (2 copies) 0.00012 13 27.00 459 495
LRR_8 Leucine rich repeat 2.5E-12 37 27.00 484 543
LRR_4 Leucine Rich repeats (2 copies) 6.2E-08 23 27.00 485 520
LRR_1 Leucine Rich Repeat 0.04 5 20.60 485 505
LRR_6 Leucine Rich repeat 0.14 3 23.40 486 497
LRR_6 Leucine Rich repeat 0.13 3 23.40 506 521
LRR_4 Leucine Rich repeats (2 copies) 1.9E-05 15 27.00 507 547
LRR_1 Leucine Rich Repeat 0.076 4 20.60 508 526
LRR_6 Leucine Rich repeat 0.27 2 23.40 532 545
LRR_1 Leucine Rich Repeat 0.064 5 20.60 533 552
LRR_6 Leucine Rich repeat 0.97 0 23.40 554 567
PRIMA1 Proline-rich membrane anchor 1 6.1E-06 17 27.60 575 646
DAG1 Dystroglycan (Dystrophin-associated glycoprotein 1) 0.00035 10 20.60 586 645
Herpes_gE Alphaherpesvirus glycoprotein E 0.00021 10 21.20 596 647
Rax2 Cortical protein marker for cell polarity 0.00012 12 27.80 597 655
TMEM154 TMEM154 protein family 1.7E-06 18 30.30 599 646
Orf78 Orf78 (ac78) 6.1E-05 14 28.00 601 645
Shisa Wnt and FGF inhibitory regulator 3E-07 21 29.70 601 661
Myc_target_1 Myc target protein 1 4.2E-05 14 31.10 611 658
Baculo_11_kDa Baculovirus 11 kDa family 0.00016 11 20.50 611 647
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 6.4E-32 101 23.10 758 956
Pkinase Protein kinase domain 6.7E-28 88 20.40 758 958

1037

LRRNT_2
LRR_8
LRR_6
LRR_4
LRR_1
LRR_1
LRR_6
LRR_6
LRR_8
LRR_1
LRR_4
LRR_1
LRR_6
LRR_8
LRR_4
LRR_4
LRR_1
LRR_6
LRR_8
LRR_6
LRR_1
LRR_4
LRR_8
LRR_4
LRR_6
LRR_4
LRR_1
LRR_4
LRR_6
LRR_1
LRR_8
LRR_1
LRR_4
LRR_4
LRR_1
LRR_8
LRR_6
LRR_6
LRR_4
LRR_1
LRR_4
LRR_8
LRR_6
LRR_1
LRR_1
LRR_4
LRR_6
LRR_8
LRR_6
LRR_1
LRR_6
LRR_4
LRR_8
LRR_4
LRR_1
LRR_6
LRR_6
LRR_4
LRR_1
LRR_6
LRR_1
LRR_6
PRIMA1
DAG1
Herpes_gE
Rax2
TMEM154
Orf78
Shisa
Myc_target_1
Baculo_11_kDa
PK_Tyr_Ser-Thr
Pkinase

References:

Orf78

Rax2

Shisa

Baculo_11_kDa

Herpes_gE
10881679 Epitopes on glycoprotein E and on the glycoprotein E/glycoprotein I complex of bovine herpesvirus 1 are expressed by all of 222 isolates and 11 vaccine strains. Arch Virol 2000;145:921-936.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_8

LRR_6

LRR_4

PRIMA1

Myc_target_1

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

TMEM154

DAG1
8872465 Cloning and expression analyses of mouse dystroglycan gene: specific expression in maternal decidua at the peri-implantation stage. Hum Mol Genet 1996;5:1259-1267.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	6.3E-12	36	20.70	6	51
LRR_8	Leucine rich repeat	9.2E-09	25	27.00	72	113
LRR_6	Leucine Rich repeat	0.81	0	23.40	77	92
LRR_4	Leucine Rich repeats (2 copies)	5.7E-07	20	27.00	78	118
LRR_1	Leucine Rich Repeat	0.0066	8	20.60	79	100
LRR_1	Leucine Rich Repeat	0.088	4	20.60	103	120
LRR_6	Leucine Rich repeat	0.18	2	23.40	103	114
LRR_6	Leucine Rich repeat	0.094	3	23.40	127	141
LRR_8	Leucine rich repeat	3.2E-10	30	27.00	127	185
LRR_1	Leucine Rich Repeat	0.012	7	20.60	127	147
LRR_4	Leucine Rich repeats (2 copies)	1.6E-07	22	27.00	127	163
LRR_1	Leucine Rich Repeat	0.0016	9	20.60	151	171
LRR_6	Leucine Rich repeat	0.027	5	23.40	151	164
LRR_8	Leucine rich repeat	4E-07	20	27.00	168	210
LRR_4	Leucine Rich repeats (2 copies)	0.31	2	27.00	172	184
LRR_4	Leucine Rich repeats (2 copies)	0.00049	11	27.00	176	212
LRR_1	Leucine Rich Repeat	0.053	5	20.60	176	195
LRR_6	Leucine Rich repeat	0.047	4	23.40	176	188
LRR_8	Leucine rich repeat	2.3E-05	14	27.00	197	234
LRR_6	Leucine Rich repeat	0.22	2	23.40	198	212
LRR_1	Leucine Rich Repeat	0.073	4	20.60	199	213
LRR_4	Leucine Rich repeats (2 copies)	0.0017	9	27.00	199	236
LRR_8	Leucine rich repeat	3E-08	24	27.00	225	283
LRR_4	Leucine Rich repeats (2 copies)	0.0056	7	27.00	228	259
LRR_6	Leucine Rich repeat	0.0026	8	23.40	247	261
LRR_4	Leucine Rich repeats (2 copies)	2.1E-07	22	27.00	248	289
LRR_1	Leucine Rich Repeat	0.0051	8	20.60	249	266
LRR_4	Leucine Rich repeats (2 copies)	1E-07	22	27.00	271	310
LRR_6	Leucine Rich repeat	0.018	6	23.40	271	285
LRR_1	Leucine Rich Repeat	0.006	8	20.60	272	288
LRR_8	Leucine rich repeat	0.0037	7	27.00	290	332
LRR_1	Leucine Rich Repeat	0.02	6	20.60	296	315
LRR_4	Leucine Rich repeats (2 copies)	0.00011	13	27.00	296	333
LRR_4	Leucine Rich repeats (2 copies)	7.6E-05	13	27.00	322	355
LRR_1	Leucine Rich Repeat	0.012	7	20.60	322	338
LRR_8	Leucine rich repeat	0.012	6	27.00	322	355
LRR_6	Leucine Rich repeat	0.0014	9	23.40	322	334
LRR_6	Leucine Rich repeat	0.00082	10	23.40	341	357
LRR_4	Leucine Rich repeats (2 copies)	0.003	8	27.00	343	362
LRR_1	Leucine Rich Repeat	0.041	5	20.60	344	359
LRR_4	Leucine Rich repeats (2 copies)	0.0003	11	27.00	368	401
LRR_8	Leucine rich repeat	3.2E-06	17	27.00	368	422
LRR_6	Leucine Rich repeat	0.09	3	23.40	387	400
LRR_1	Leucine Rich Repeat	0.022	6	20.60	387	404
LRR_1	Leucine Rich Repeat	0.098	4	20.60	414	427
LRR_4	Leucine Rich repeats (2 copies)	4.4E-07	20	27.00	414	448
LRR_6	Leucine Rich repeat	0.056	4	23.40	414	424
LRR_8	Leucine rich repeat	3.3E-10	30	27.00	414	469
LRR_6	Leucine Rich repeat	0.029	5	23.40	435	448
LRR_1	Leucine Rich Repeat	0.00039	11	20.60	436	456
LRR_6	Leucine Rich repeat	0.22	2	23.40	458	473
LRR_4	Leucine Rich repeats (2 copies)	0.00012	13	27.00	459	495
LRR_8	Leucine rich repeat	2.5E-12	37	27.00	484	543
LRR_4	Leucine Rich repeats (2 copies)	6.2E-08	23	27.00	485	520
LRR_1	Leucine Rich Repeat	0.04	5	20.60	485	505
LRR_6	Leucine Rich repeat	0.14	3	23.40	486	497
LRR_6	Leucine Rich repeat	0.13	3	23.40	506	521
LRR_4	Leucine Rich repeats (2 copies)	1.9E-05	15	27.00	507	547
LRR_1	Leucine Rich Repeat	0.076	4	20.60	508	526
LRR_6	Leucine Rich repeat	0.27	2	23.40	532	545
LRR_1	Leucine Rich Repeat	0.064	5	20.60	533	552
LRR_6	Leucine Rich repeat	0.97	0	23.40	554	567
PRIMA1	Proline-rich membrane anchor 1	6.1E-06	17	27.60	575	646
DAG1	Dystroglycan (Dystrophin-associated glycoprotein 1)	0.00035	10	20.60	586	645
Herpes_gE	Alphaherpesvirus glycoprotein E	0.00021	10	21.20	596	647
Rax2	Cortical protein marker for cell polarity	0.00012	12	27.80	597	655
TMEM154	TMEM154 protein family	1.7E-06	18	30.30	599	646
Orf78	Orf78 (ac78)	6.1E-05	14	28.00	601	645
Shisa	Wnt and FGF inhibitory regulator	3E-07	21	29.70	601	661
Myc_target_1	Myc target protein 1	4.2E-05	14	31.10	611	658
Baculo_11_kDa	Baculovirus 11 kDa family	0.00016	11	20.50	611	647
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	6.4E-32	101	23.10	758	956
Pkinase	Protein kinase domain	6.7E-28	88	20.40	758	958