c2pfam

AT4G21230.1 :

Domain Description Evalue Bits GA Start End
Stress-antifung Salt stress response/antifungal 2.3E-17 54 25.00 39 126
Stress-antifung Salt stress response/antifungal 2.4E-17 54 25.00 147 237
Spindle_Spc25 Chromosome segregation protein Spc25 0.00027 11 22.30 168 203
TMEM51 Transmembrane protein 51 0.00014 12 25.50 247 310
Psg1 Ykl077w/Psg1 (Pma1 Stabilization in Golgi) 0.00023 11 30.10 247 301
DUF515 Protein of unknown function (DUF515) 5.7E-05 12 21.50 250 318
RIC3 Resistance to inhibitors of cholinesterase homologue 3 1.1E-05 16 28.90 253 310
TMEM154 TMEM154 protein family 3.5E-06 17 30.30 255 360
Glycophorin_A Glycophorin A 0.00022 12 22.70 256 307
CD34_antigen CD34/Podocalyxin family 2.2E-05 14 21.90 261 330
RIFIN Rifin 2.2E-05 15 32.00 267 306
CcmH Cytochrome C biogenesis protein 2.3E-05 14 25.00 272 310
SKG6 Transmembrane alpha-helix domain 0.0023 8 42.00 279 299
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 167 23.10 334 603
Pkinase Protein kinase domain 0 161 20.40 335 601
Pkinase_fungal Fungal protein kinase 0.00014 11 24.10 453 521
DUF3403 Domain of unknown function (DUF3403) 0.00025 11 27.30 607 636

642

Stress-antifung
Stress-antifung
Spindle_Spc25
TMEM51
Psg1
DUF515
RIC3
TMEM154
Glycophorin_A
CD34_antigen
RIFIN
CcmH
SKG6
PK_Tyr_Ser-Thr
Pkinase
Pkinase_fungal
DUF3403

References:

CD34_antigen
1694174 Activated protein kinase C directly phosphorylates the CD34 antigen on hematopoietic cells. J Biol Chem 1990;265:11056-11061.
10982412 Expression of podocalyxin inhibits cell-cell adhesion and modifies junctional properties in Madin-Darby canine kidney cells. Mol Biol Cell 2000;11:3219-3232.
10722749 Identification of endoglycan, a member of the CD34/podocalyxin family of sialomucins. J Biol Chem 2000;275:9001-9010.

Pkinase_fungal

RIC3

Glycophorin_A

CcmH
9914305 Characterization of the Escherichia coli CcmH protein reveals new insights into the redox pathway required for cytochrome c maturation. Arch Microbiol 1999;171:92-100.

Stress-antifung

DUF515

Spindle_Spc25
15728720 Dissociation of the Nuf2-Ndc80 Complex Releases Centromeres from the Spindle-Pole Body during Meiotic Prophase in Fission Yeast. Mol Biol Cell 2005; [Epub ahead of print]
14738735 The vertebrate Ndc80 complex contains Spc24 and Spc25 homologs, which are required to establish and maintain kinetochore-microtubule attachment. Curr Biol 2004;14:131-137.

SKG6
16314687 SKG6, a suppressor gene of synthetic lethality of kex2Delta gas1Delta mutations, encodes a novel membrane protein showing polarized intracellular localization. J Gen Appl Microbiol. 2005;51:323-326.
16816427 Four novel suppressors of gic1 gic2 and their roles in cytokinesis and polarized cell growth in Saccharomyces cerevisiae. Genetics. 2006;174:665-678.
17460121 Sequential and distinct roles of the cadherin domain-containing protein Axl2p in cell polarization in yeast cell cycle. Mol Biol Cell. 2007;18:2542-2560.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

DUF3403

PK_Tyr_Ser-Thr

TMEM154

RIFIN

TMEM51

Psg1

Domain	Description	Evalue	Bits	GA	Start	End
Stress-antifung	Salt stress response/antifungal	2.3E-17	54	25.00	39	126
Stress-antifung	Salt stress response/antifungal	2.4E-17	54	25.00	147	237
Spindle_Spc25	Chromosome segregation protein Spc25	0.00027	11	22.30	168	203
TMEM51	Transmembrane protein 51	0.00014	12	25.50	247	310
Psg1	Ykl077w/Psg1 (Pma1 Stabilization in Golgi)	0.00023	11	30.10	247	301
DUF515	Protein of unknown function (DUF515)	5.7E-05	12	21.50	250	318
RIC3	Resistance to inhibitors of cholinesterase homologue 3	1.1E-05	16	28.90	253	310
TMEM154	TMEM154 protein family	3.5E-06	17	30.30	255	360
Glycophorin_A	Glycophorin A	0.00022	12	22.70	256	307
CD34_antigen	CD34/Podocalyxin family	2.2E-05	14	21.90	261	330
RIFIN	Rifin	2.2E-05	15	32.00	267	306
CcmH	Cytochrome C biogenesis protein	2.3E-05	14	25.00	272	310
SKG6	Transmembrane alpha-helix domain	0.0023	8	42.00	279	299
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	167	23.10	334	603
Pkinase	Protein kinase domain	0	161	20.40	335	601
Pkinase_fungal	Fungal protein kinase	0.00014	11	24.10	453	521
DUF3403	Domain of unknown function (DUF3403)	0.00025	11	27.30	607	636