c2pfam

AT4G23570.1 :

Domain Description Evalue Bits GA Start End
Alkyl_sulf_dimr Alkyl sulfatase dimerisation 0.00089 10 26.00 3 55
TPR_2 Tetratricopeptide repeat 5.3E-05 14 22.40 5 35
TPR_16 Tetratricopeptide repeat 4.3E-08 24 32.70 7 68
TPR_14 Tetratricopeptide repeat 0.0028 9 23.50 15 37
TPR_19 Tetratricopeptide repeat 3.4E-08 24 25.00 16 56
TPR_9 Tetratricopeptide repeat 2.1E-07 21 35.00 16 72
TPR_6 Tetratricopeptide repeat 0.29 2 26.30 16 34
TPR_7 Tetratricopeptide repeat 0.058 4 27.90 17 36
TPR_8 Tetratricopeptide repeat 0.0035 8 25.70 17 35
TPR_1 Tetratricopeptide repeat 0.00019 12 20.40 17 35
TPR_11 TPR repeat 4.9E-07 20 26.80 18 49
TPR_12 Tetratricopeptide repeat 0.0025 8 30.10 18 67
TPR_15 Tetratricopeptide repeat 0.0039 7 26.20 19 97
TPR_17 Tetratricopeptide repeat 0.00074 10 24.40 24 49
TPR_2 Tetratricopeptide repeat 4.3E-07 20 22.40 36 68
TPR_8 Tetratricopeptide repeat 2.2E-07 21 25.70 37 68
TPR_1 Tetratricopeptide repeat 5.5E-08 23 20.40 37 68
TPR_14 Tetratricopeptide repeat 1.5E-05 16 23.50 37 77
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 1.7E-06 19 27.20 39 95
TPR_16 Tetratricopeptide repeat 1.1E-05 16 32.70 41 89
TPR_6 Tetratricopeptide repeat 0.46 2 26.30 43 67
TPR_11 TPR repeat 1.9E-06 18 26.80 44 82
TPR_19 Tetratricopeptide repeat 0.00017 12 25.00 51 110
TPR_17 Tetratricopeptide repeat 0.0002 12 24.40 60 90
TPR_9 Tetratricopeptide repeat 0.23 2 35.00 65 102
Alkyl_sulf_dimr Alkyl sulfatase dimerisation 0.83 0 26.00 71 109
TPR_14 Tetratricopeptide repeat 0.0015 10 23.50 71 104
TPR_1 Tetratricopeptide repeat 4.4E-05 14 20.40 71 96
TPR_8 Tetratricopeptide repeat 9.8E-06 16 25.70 71 102
TPR_2 Tetratricopeptide repeat 0.00012 13 22.40 71 101
TPR_6 Tetratricopeptide repeat 0.063 5 26.30 72 95
TPR_12 Tetratricopeptide repeat 0.84 0 30.10 72 95
TPR_7 Tetratricopeptide repeat 0.035 5 27.90 72 95
CS CS domain 9.6E-18 55 21.30 153 228
TPR_15 Tetratricopeptide repeat 0.018 4 26.20 265 305
SGS SGS domain 0 123 21.90 268 348

350

Alkyl_sulf_dimr
TPR_2
TPR_16
TPR_14
TPR_19
TPR_9
TPR_6
TPR_7
TPR_8
TPR_1
TPR_11
TPR_12
TPR_15
TPR_17
TPR_2
TPR_8
TPR_1
TPR_14
ANAPC3
TPR_16
TPR_6
TPR_11
TPR_19
TPR_17
TPR_9
Alkyl_sulf_dimr
TPR_14
TPR_1
TPR_8
TPR_2
TPR_6
TPR_12
TPR_7
CS
TPR_15
SGS

References:

TPR_7

TPR_6

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_19

TPR_17

TPR_16

TPR_15

TPR_14

TPR_12

TPR_11

Alkyl_sulf_dimr

SGS
11847307 The RAR1 interactor SGT1, an essential component of R gene-triggered disease resistance. Science 2002;295:2073-2076.

ANAPC3

CS
10571178 A novel class of eukaryotic zinc-binding proteins is required for disease resistance signaling in barley and development in C. elegans. Cell 1999;99:355-366.
14761955 Human Sgt1 binds HSP90 through the CHORD-Sgt1 domain and not the tetratricopeptide repeat domain. J Biol Chem 2004;279:16511-16517.

TPR_9

TPR_8

Domain	Description	Evalue	Bits	GA	Start	End
Alkyl_sulf_dimr	Alkyl sulfatase dimerisation	0.00089	10	26.00	3	55
TPR_2	Tetratricopeptide repeat	5.3E-05	14	22.40	5	35
TPR_16	Tetratricopeptide repeat	4.3E-08	24	32.70	7	68
TPR_14	Tetratricopeptide repeat	0.0028	9	23.50	15	37
TPR_19	Tetratricopeptide repeat	3.4E-08	24	25.00	16	56
TPR_9	Tetratricopeptide repeat	2.1E-07	21	35.00	16	72
TPR_6	Tetratricopeptide repeat	0.29	2	26.30	16	34
TPR_7	Tetratricopeptide repeat	0.058	4	27.90	17	36
TPR_8	Tetratricopeptide repeat	0.0035	8	25.70	17	35
TPR_1	Tetratricopeptide repeat	0.00019	12	20.40	17	35
TPR_11	TPR repeat	4.9E-07	20	26.80	18	49
TPR_12	Tetratricopeptide repeat	0.0025	8	30.10	18	67
TPR_15	Tetratricopeptide repeat	0.0039	7	26.20	19	97
TPR_17	Tetratricopeptide repeat	0.00074	10	24.40	24	49
TPR_2	Tetratricopeptide repeat	4.3E-07	20	22.40	36	68
TPR_8	Tetratricopeptide repeat	2.2E-07	21	25.70	37	68
TPR_1	Tetratricopeptide repeat	5.5E-08	23	20.40	37	68
TPR_14	Tetratricopeptide repeat	1.5E-05	16	23.50	37	77
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	1.7E-06	19	27.20	39	95
TPR_16	Tetratricopeptide repeat	1.1E-05	16	32.70	41	89
TPR_6	Tetratricopeptide repeat	0.46	2	26.30	43	67
TPR_11	TPR repeat	1.9E-06	18	26.80	44	82
TPR_19	Tetratricopeptide repeat	0.00017	12	25.00	51	110
TPR_17	Tetratricopeptide repeat	0.0002	12	24.40	60	90
TPR_9	Tetratricopeptide repeat	0.23	2	35.00	65	102
Alkyl_sulf_dimr	Alkyl sulfatase dimerisation	0.83	0	26.00	71	109
TPR_14	Tetratricopeptide repeat	0.0015	10	23.50	71	104
TPR_1	Tetratricopeptide repeat	4.4E-05	14	20.40	71	96
TPR_8	Tetratricopeptide repeat	9.8E-06	16	25.70	71	102
TPR_2	Tetratricopeptide repeat	0.00012	13	22.40	71	101
TPR_6	Tetratricopeptide repeat	0.063	5	26.30	72	95
TPR_12	Tetratricopeptide repeat	0.84	0	30.10	72	95
TPR_7	Tetratricopeptide repeat	0.035	5	27.90	72	95
CS	CS domain	9.6E-18	55	21.30	153	228
TPR_15	Tetratricopeptide repeat	0.018	4	26.20	265	305
SGS	SGS domain	0	123	21.90	268	348