c2pfam

AT1G20440.1 :

Domain Description Evalue Bits GA Start End
HSP9_HSP12 Heat shock protein 9/12 0.075 2 21.20 36 50
Mem_trans Membrane transport protein 0.0044 4 25.70 65 134
Dehydrin Dehydrin 4.6E-22 68 21.70 78 198
CNDH2_M Condensin II complex subunit CAP-H2 or CNDH2, mid domain 0.00013 11 27.60 81 177
NOPS NOPS (NUC059) domain 0.079 2 20.20 130 148
HSP9_HSP12 Heat shock protein 9/12 0.0012 8 21.20 135 158
VitD-bind_III Vitamin D binding protein, domain III 0.021 4 20.70 136 155
NOPS NOPS (NUC059) domain 0.015 4 20.20 173 200
HSP9_HSP12 Heat shock protein 9/12 0.002 7 21.20 178 203
VitD-bind_III Vitamin D binding protein, domain III 0.025 4 20.70 183 200
Dehydrin Dehydrin 2.1E-09 27 21.70 214 249
NOPS NOPS (NUC059) domain 0.018 4 20.20 227 250
HSP9_HSP12 Heat shock protein 9/12 0.005 6 21.20 231 248
VitD-bind_III Vitamin D binding protein, domain III 0.021 4 20.70 234 259

265

HSP9_HSP12
Mem_trans
Dehydrin
CNDH2_M
NOPS
HSP9_HSP12
VitD-bind_III
NOPS
HSP9_HSP12
VitD-bind_III
Dehydrin
NOPS
HSP9_HSP12
VitD-bind_III

References:

Mem_trans

NOPS
15112237 Insights into the evolution of the nucleolus by an analysis of its protein domain repertoire. Bioessays 2004;26:567-581.

HSP9_HSP12
2175390 HSP12, a new small heat shock gene of Saccharomyces cerevisiae: analysis of structure, regulation and function. Mol Gen Genet 1990;223:97-106.
8679693 Cloning, sequencing and regulation of a cDNA encoding a small heat-shock protein from Schizosaccharomyces pombe. Biochim Biophys Acta 1996;1307:129-131.

CNDH2_M

VitD-bind_III
12048248 Crystal structures of the vitamin D-binding protein and its complex with actin: structural basis of the actin-scavenger system. Proc Natl Acad Sci U S A. 2002;99:8003-8008.

Dehydrin

Domain	Description	Evalue	Bits	GA	Start	End
HSP9_HSP12	Heat shock protein 9/12	0.075	2	21.20	36	50
Mem_trans	Membrane transport protein	0.0044	4	25.70	65	134
Dehydrin	Dehydrin	4.6E-22	68	21.70	78	198
CNDH2_M	Condensin II complex subunit CAP-H2 or CNDH2, mid domain	0.00013	11	27.60	81	177
NOPS	NOPS (NUC059) domain	0.079	2	20.20	130	148
HSP9_HSP12	Heat shock protein 9/12	0.0012	8	21.20	135	158
VitD-bind_III	Vitamin D binding protein, domain III	0.021	4	20.70	136	155
NOPS	NOPS (NUC059) domain	0.015	4	20.20	173	200
HSP9_HSP12	Heat shock protein 9/12	0.002	7	21.20	178	203
VitD-bind_III	Vitamin D binding protein, domain III	0.025	4	20.70	183	200
Dehydrin	Dehydrin	2.1E-09	27	21.70	214	249
NOPS	NOPS (NUC059) domain	0.018	4	20.20	227	250
HSP9_HSP12	Heat shock protein 9/12	0.005	6	21.20	231	248
VitD-bind_III	Vitamin D binding protein, domain III	0.021	4	20.70	234	259