c2pfam

AT4G27060.1 :

Domain Description Evalue Bits GA Start End
Dopey_N Dopey, N-terminal 0.00047 9 25.20 48 134
HEAT_2 HEAT repeats 0.0013 9 27.70 54 140
MMS19_N NER and RNAPII transcription protein n terminal 0.0006 9 21.40 56 126
Utp12 Dip2/Utp12 Family 4.7E-05 13 26.00 60 148
HEAT_EZ HEAT-like repeat 0.46 1 27.00 70 104
Adaptin_N Adaptin N terminal region 1.5E-06 17 20.30 74 286
Dopey_N Dopey, N-terminal 0.00053 9 25.20 76 289
HEAT HEAT repeat 0.01 6 23.50 81 109
Cnd1 non-SMC mitotic condensation complex subunit 1 1.3E-05 15 26.40 81 144
CLASP_N CLASP N terminal 1.4E-05 14 27.00 82 148
Vac14_Fab1_bd Vacuolar 14 Fab1-binding region 0.0058 7 22.10 97 140
HEAT_EZ HEAT-like repeat 0.0076 7 27.00 118 141
Cohesin_HEAT HEAT repeat associated with sister chromatid cohesion 9.8E-05 12 21.00 121 141
HEAT HEAT repeat 0.00064 10 23.50 123 149
HEAT_2 HEAT repeats 0.084 3 27.70 127 205
Vac14_Fab1_bd Vacuolar 14 Fab1-binding region 0.36 1 22.10 168 224
CLASP_N CLASP N terminal 0.07 2 27.00 171 204
Cnd1 non-SMC mitotic condensation complex subunit 1 0.04 4 26.40 172 201
MMS19_N NER and RNAPII transcription protein n terminal 0.019 4 21.40 186 292
CLASP_N CLASP N terminal 0.0024 7 27.00 224 284
HEAT_EZ HEAT-like repeat 0.0018 9 27.00 243 279
Vac14_Fab1_bd Vacuolar 14 Fab1-binding region 0.11 3 22.10 244 312
Utp12 Dip2/Utp12 Family 0.65 0 26.00 244 299
Cnd1 non-SMC mitotic condensation complex subunit 1 0.00016 11 26.40 246 322
HEAT_2 HEAT repeats 2.4E-06 18 27.70 248 317
HEAT HEAT repeat 1.5E-05 15 23.50 260 282

864

Dopey_N
HEAT_2
MMS19_N
Utp12
HEAT_EZ
Adaptin_N
Dopey_N
HEAT
Cnd1
CLASP_N
Vac14_Fab1_bd
HEAT_EZ
Cohesin_HEAT
HEAT
HEAT_2
Vac14_Fab1_bd
CLASP_N
Cnd1
MMS19_N
CLASP_N
HEAT_EZ
Vac14_Fab1_bd
Utp12
Cnd1
HEAT_2
HEAT

References:

HEAT_2

Vac14_Fab1_bd

Cohesin_HEAT

HEAT
7550332 HEAT repeats in the Huntington's disease protein. Nat Genet 1995;11:115-116.
9989501 The structure of the protein phosphatase 2A PR65/A subunit reveals the conformation of its 15 tandemly repeated HEAT motifs. Cell 1999;96:99-110.

Dopey_N
10931277 Morphogenesis in Aspergillus nidulans requires Dopey (DopA), a member of a novel family of leucine zipper-like proteins conserved from yeast to humans. Mol Microbiol 2000;36:1250-1264.

Utp12
12068309 A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature 2002;0:0-0.

Cnd1

Adaptin_N
9261055 Linking cargo to vesicle formation: receptor tail interactions with coat proteins. Curr Opin Cell Biol 1997;9:488-495.
2495531 Structural and functional division into two domains of the large (100- to 115-kDa)chains of the clathrin-associated protein complex AP-2. Proc Natl Acad Sci U S A 1989;86:2612-2616.

CLASP_N
16951255 S. pombe CLASP needs dynein, not EB1 or CLIP170, to induce microtubule instability and slows polymerization rates at cell tips in a dynein-dependent manner. Genes Dev. 2006;20:2421-2436.
16914514 Mammalian CLASP1 and CLASP2 cooperate to ensure mitotic fidelity by regulating spindle and kinetochore function. Mol Biol Cell. 2006;17:4526-4542.

MMS19_N
11328871 Cloning the human and mouse MMS19 genes and functional complementation of a yeast mms19 deletion mutant. Nucleic Acids Res. 2001;29:1884-1891.

HEAT_EZ

Domain	Description	Evalue	Bits	GA	Start	End
Dopey_N	Dopey, N-terminal	0.00047	9	25.20	48	134
HEAT_2	HEAT repeats	0.0013	9	27.70	54	140
MMS19_N	NER and RNAPII transcription protein n terminal	0.0006	9	21.40	56	126
Utp12	Dip2/Utp12 Family	4.7E-05	13	26.00	60	148
HEAT_EZ	HEAT-like repeat	0.46	1	27.00	70	104
Adaptin_N	Adaptin N terminal region	1.5E-06	17	20.30	74	286
Dopey_N	Dopey, N-terminal	0.00053	9	25.20	76	289
HEAT	HEAT repeat	0.01	6	23.50	81	109
Cnd1	non-SMC mitotic condensation complex subunit 1	1.3E-05	15	26.40	81	144
CLASP_N	CLASP N terminal	1.4E-05	14	27.00	82	148
Vac14_Fab1_bd	Vacuolar 14 Fab1-binding region	0.0058	7	22.10	97	140
HEAT_EZ	HEAT-like repeat	0.0076	7	27.00	118	141
Cohesin_HEAT	HEAT repeat associated with sister chromatid cohesion	9.8E-05	12	21.00	121	141
HEAT	HEAT repeat	0.00064	10	23.50	123	149
HEAT_2	HEAT repeats	0.084	3	27.70	127	205
Vac14_Fab1_bd	Vacuolar 14 Fab1-binding region	0.36	1	22.10	168	224
CLASP_N	CLASP N terminal	0.07	2	27.00	171	204
Cnd1	non-SMC mitotic condensation complex subunit 1	0.04	4	26.40	172	201
MMS19_N	NER and RNAPII transcription protein n terminal	0.019	4	21.40	186	292
CLASP_N	CLASP N terminal	0.0024	7	27.00	224	284
HEAT_EZ	HEAT-like repeat	0.0018	9	27.00	243	279
Vac14_Fab1_bd	Vacuolar 14 Fab1-binding region	0.11	3	22.10	244	312
Utp12	Dip2/Utp12 Family	0.65	0	26.00	244	299
Cnd1	non-SMC mitotic condensation complex subunit 1	0.00016	11	26.40	246	322
HEAT_2	HEAT repeats	2.4E-06	18	27.70	248	317
HEAT	HEAT repeat	1.5E-05	15	23.50	260	282